Evidence map›Paper›PMID 20969830›Full record

ArticleBiochimica et biophysica acta2011

Functional reconstitution of influenza A M2(22-62).

Emily Peterson, Ted Ryser, Spencer Funk, Daniel Inouye, Mukesh Sharma, Huajun Qin, Timothy A Cross, David D Busath

Abstract read
In one paragraph

Article in Biochimica et biophysica acta, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
2.1field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 21 citations in OpenAlex.

  1. Article
  2. Review
  3. M2 amphipathic helices facilitate pH-dependent conformational transition in influenza A virus.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  4. Voltage and pH sensing by the voltage-gated proton channel, HJournal of the Royal Society, Interface · 2018
    Review
  5. Article
  6. Article
  7. Philosophy of voltage-gated proton channels.Journal of the Royal Society, Interface · 2014
    Review
  8. Article
  9. Chemical science · 2013
    Article
  10. Review
  11. Review
  12. Review
  13. Biophysical properties of the voltage gated proton channel H(V)1.Wiley interdisciplinary reviews. Membrane transport and signaling · 2012
    Article
  14. Voltage-gated proton channels.Comprehensive Physiology · 2012
    Review
  15. Article
  16. Proton and cation transport activity of the M2 proton channel from influenza A virus.Proceedings of the National Academy of Sciences of the United States of America · 2010
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Emily PetersonDepartment of Physiology and Developmental Biology, Brigham Young University, Provo, UT 84602 USA. epetey63@gmail.com
Ted Ryser
Spencer Funk
Daniel Inouye
Mukesh Sharma
Huajun Qin
Timothy A Cross
David D Busath
Brigham Young University · USFlorida State University · US

Funding

DYNAMIC AND STRUCTURAL ELUCIDATION OF GRAMICIDIN A'R01AI023007 · NIAID · FLORIDA STATE UNIVERSITY · PI CROSS, TIMOTHY A · 1987 to 2014
$5.1M
NIAID NIH HHS AI23007NIAID NIH HHS R01 AI023007
6 · The paper itself

Abstract

Amantadine-sensitive proton uptake by liposomes is currently the preferred method of demonstrating M2 functionality after reconstitution, to validate structural determination with techniques such as solid-state NMR. With strong driving forces (two decades each of both [K(+)] gradient-induced membrane potential and [H(+)] gradient), M2(22-62) showed a transport rate of 78 H(+)/tetramer-s (pH(o) 6.0, pH(i) 8.0, nominal V(m)=-114 mV), higher than previously measured for similar, shorter, and full-length constructs. Amantadine sensitivity of the conductance domain at pH 6.8 was also comparable to other published reports. Proton flux rate was optimal at protein densities of 0.05-1.0% (peptide wt.% in lipid). Rundown of total proton uptake after addition of valinomycin and CCCP, as detected by delayed addition of valinomycin, indicated M2-induced K(+) flux of 0.1K(+)/tetramer-s, and also demonstrated that the K(+) permeability, relative to H(+), was 2.8 × 10(-6). Transport rate, amantadine and cyclooctylamine sensitivity, acid activation, and H(+) selectivity were all consistent with full functionality of the reconstituted conductance domain. Decreased external pH increased proton uptake with an apparent pK(a) of 6.

Indexed as

AmantadineCarbonyl Cyanide m-Chlorophenyl HydrazoneHydrogen-Ion ConcentrationInfluenza A virusIon ChannelsKineticsLiposomesMembrane PotentialsPeptide FragmentsRecombinant ProteinsValinomycinViral Matrix ProteinsViroporin ProteinsAmantadineCarbonyl Cyanide m-Chlorophenyl HydrazoneIon ChannelsLiposomesM2 protein, Influenza A virusPeptide FragmentsRecombinant ProteinsValinomycinViral Matrix ProteinsViroporin Proteins

Identifiers

PMID20969830
PMCPMC3005097
OpenAlexW1966254614

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.