Evidence map›Paper›PMID 20963423›Full record

ArticleJournal of comparative physiology. B, Biochemical, systemic, and environmental physiology2011

Changes of globin expression in the Japanese medaka (Oryzias latipes) in response to acute and chronic hypoxia.

Agnes Wawrowski, Frank Gerlach, Thomas Hankeln, Thorsten Burmester

Abstract readComparative Study
PubMed Publisher
In one paragraph

Article in Journal of comparative physiology. B, Biochemical, systemic, and environmental physiology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.7field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 46 citations in OpenAlex.

  1. Article
  2. Article
  3. The Zebrafish CytochromeBiochemistry · 2019
    Article
  4. Article
  5. Review
  6. Article
  7. Changes of hemoglobin expression in response to hypoxia in a Tibetan schizothoracine fish, Schizopygopsis pylzovi.Journal of comparative physiology. B, Biochemical, systemic, and environmental physiology · 2016
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Agnes WawrowskiBiocenter Grindel, Institute of Zoology, University of Hamburg, Martin-Luther-King-Platz 3, 20146, Hamburg, Germany.
Frank Gerlach
Thomas Hankeln
Thorsten Burmester
Universität Hamburg · DEJohannes Gutenberg University Mainz · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Fishes live in an aquatic environment with low or temporally changing O(2) availability. Variations in O(2) levels require many anatomical, behavioral, physiological, and biochemical adaptations that ensure the uptake of an adequate amount of O(2). Some fish species are comparatively well adapted to tolerate low O(2) partial pressure (hypoxia). The Japanese ricefish medaka (Oryzias latipes) is an important model organism for biomedical research that shows remarkable tolerance towards hypoxia. We have investigated the regulation and role of globins under hypoxia. We applied four different regimes of chronic hypoxia (24 and 48 h at PO(2) = 2 or 4 kPa) as well as acute hypoxia (2 h at PO(2) = 0.5 kPa) to adult male medaka. Changes of mRNA levels of seven globin genes (adult hemoglobin α and β, myoglobin, neuroglobin, cytoglobin 1 and 2, globin X), three hypoxia-response genes (lactate dehydrogenase b, phosphoglycerate kinase, adrenomedullin 1) and two putative reference genes (cyclophilin, acidic ribosomal phosphoprotein P0) were monitored by means of quantitative real-time reverse-transcription PCR. We observed strong upregulation of myoglobin, which is also expressed in the medaka brain, as previously demonstrated for carp, goldfish and zebrafish. The hemoglobin chains were found upregulated, whereas earlier studies found down-regulation of hemoglobin in hypoxic zebrafish. By contrast, neuroglobin mRNA was not affected by hypoxia in medaka, but had been found upregulated in zebrafish. Globin X is induced in medaka brain, but down-regulated in zebrafish. Thus, the patterns of hypoxia response of globins are strikingly different in various fish species, which can be interpreted as indication for different roles of the various globins in hypoxia response and for alternative metabolic strategies of fish species in coping with O(2) deprivation.

Indexed as

Adaptation, BiologicalAdrenomedullinAnimalsComputational BiologyGene Expression RegulationGlobinsHypoxiaIsoenzymesL-Lactate DehydrogenaseMaleOryziasOxygenPhosphoglycerate KinaseReverse Transcriptase Polymerase Chain ReactionRNA, MessengerSpecies SpecificityAdrenomedullinGlobinsIsoenzymeslactate dehydrogenase 1L-Lactate DehydrogenaseOxygenPhosphoglycerate KinaseRNA, Messenger

Identifiers

PMID20963423
OpenAlexW2044195292

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.