Evidence map›Paper›PMID 20961438›Full record

ArticleBMC research notes2010

Using gene expression profiles from peripheral blood to identify asymptomatic responses to acute respiratory viral infections.

Alexander Statnikov, Nikita I Lytkin, Lauren McVoy, Jörn-Hendrik Weitkamp, Constantin F Aliferis

Abstract read
In one paragraph

Article in BMC research notes, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Alexander StatnikovCenter for Health Informatics and Bioinformatics, New York University School of Medicine, New York, NY 10016, USA. alexander.statnikov@med.nyu.edu.
Nikita I Lytkin
Lauren McVoy
Jörn-Hendrik Weitkamp
Constantin F Aliferis

Funding

Development of Intestinal Immune Regulation in Human InfantsK08HD061607 · NICHD · VANDERBILT UNIVERSITY · PI WEITKAMP, JOERN-HENDRIK · 2009 to 2013
$628k
NICHD NIH HHS K08 HD061607
6 · The paper itself

Abstract

backgroundA recent study reported that gene expression profiles from peripheral blood samples of healthy subjects prior to viral inoculation were indistinguishable from profiles of subjects who received viral challenge but remained asymptomatic and uninfected. If true, this implies that the host immune response does not have a molecular signature. Given the high sensitivity of microarray technology, we were intrigued by this result and hypothesize that it was an artifact of data analysis.

findingsUsing acute respiratory viral challenge microarray data, we developed a molecular signature that for the first time allowed for an accurate differentiation between uninfected subjects prior to viral inoculation and subjects who remained asymptomatic after the viral challenge.

conclusionsOur findings suggest that molecular signatures can be used to characterize immune responses to viruses and may improve our understanding of susceptibility to viral infection with possible implications for vaccine development.

Identifiers

PMID20961438
PMCPMC2975649

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.