ArticleNucleic acids research2011
The Pancreatic Expression database: 2011 update.
Article in Nucleic acids research, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers, 1 of them a synthesis that pooled it.
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
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Who cites it
18 citing papers in PubMed, 1 synthesis or guideline pooled it.
- Comparison of tumour and serum specific microRNA changes dissecting their role in pancreatic ductal adenocarcinoma: a meta-analysis.BMC cancer · 2019Pooled it
- Exploring DNA Damage and Repair Mechanisms: A Review with Computational Insights.Biotech (Basel (Switzerland)) · 2024Review
- Systems Biology and Experimental Model Systems of Cancer.Journal of personalized medicine · 2020Review
- The A818-6 system as an in-vitro model for studying the role of the transportome in pancreatic cancer.BMC cancer · 2020Article
- The Pancreatic Expression Database: 2018 update.Nucleic acids research · 2018Article
- Disorders noticed during development of pancreatic cancer: potential opportunities for early and effective diagnostics and therapy.Central-European journal of immunology · 2017Review
- MicroRNA Targeted Therapeutic Approach for Pancreatic Cancer.International journal of biological sciences · 2016Review
- Pancreatic preneoplastic lesions plasma signatures and biomarkers based on proteome profiling of mouse models.British journal of cancer · 2015Article
- Sgo1 is a potential therapeutic target for hepatocellular carcinoma.Oncotarget · 2015Article
- miR-148a- and miR-216a-regulated oncolytic adenoviruses targeting pancreatic tumors attenuate tissue damage without perturbation of miRNA activity.Molecular therapy : the journal of the American Society of Gene Therapy · 2014Article
- The pancreatic expression database: recent extensions and updates.Nucleic acids research · 2014Article
- Reuse of public genome-wide gene expression data.Nature reviews. Genetics · 2013Review
- Article
- Identification of germline genomic copy number variation in familial pancreatic cancer.Human genetics · 2012Article
- A global insight into a cancer transcriptional space using pancreatic data: importance, findings and flaws.Nucleic acids research · 2011Article
- Integrated proteomic profiling of cell line conditioned media and pancreatic juice for the identification of pancreatic cancer biomarkers.Molecular & cellular proteomics : MCP · 2011Article
- Using BioMart as a framework to manage and query pancreatic cancer data.Database : the journal of biological databases and curation · 2011Article
- Integration of proteomics into systems biology of cancer.Wiley interdisciplinary reviews. Systems biology and medicineReview
Corrections and comments
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Authors and funding
6 authors.
Funding
Abstract
The Pancreatic Expression database (PED, http://www.pancreasexpression.org) has established itself as the main repository for pancreatic-derived -omics data. For the past 3 years, its data content and access have increased substantially. Here we describe several of its new and improved features, such as data content, which now includes over 60,000 measurements derived from transcriptomics, proteomics, genomics and miRNA profiles from various pancreas-centred reports on a broad range of specimen and experimental types. We also illustrate the capabilities of its interface, which allows integrative queries that can combine PED data with a growing number of biological resources such as NCBI, Ensembl, UniProt and Reactome. Thus, PED is capable of retrieving and integrating different types of -omics, annotations and clinical data. We also focus on the importance of data sharing and interoperability in the cancer field, and the integration of PED into the International Cancer Genome Consortium (ICGC) data portal.
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.