ReviewGenome biology2010
Capturing the dynamic epigenome.
Review in Genome biology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
23 citing papers in PubMed.
- Chromatin structure-dependent histone incorporation revealed by a genome-wide deposition assay.eLife · 2021Article
- An embryonic stem cell-specific heterochromatin state promotes core histone exchange in the absence of DNA accessibility.Nature communications · 2020Article
- Application of Recombination -Induced Tag Exchange (RITE) to study histone dynamics in human cells.Epigenetics · 2020Article
- A nucleosome turnover map reveals that the stability of histone H4 Lys20 methylation depends on histone recycling in transcribed chromatin.Genome research · 2015Article
- High-resolution chromatin dynamics during a yeast stress response.Molecular cell · 2015Article
- Histone exchange, chromatin structure and the regulation of transcription.Nature reviews. Molecular cell biology · 2015Review
- Temporally and spatially restricted gene expression profiling.Current genomics · 2014Article
- A system for genome-wide histone variant dynamics in ES cells reveals dynamic MacroH2A2 replacement at promoters.PLoS genetics · 2014Article
- Epigenomics and the concept of degeneracy in biological systems.Briefings in functional genomics · 2014Review
- Comprehensive analysis of interacting proteins and genome-wide location studies of the Sas3-dependent NuA3 histone acetyltransferase complex.FEBS open bio · 2014Article
- High-resolution analysis of DNA synthesis start sites and nucleosome architecture at efficient mammalian replication origins.The EMBO journal · 2013Article
- Recombination-induced tag exchange (RITE) cassette series to monitor protein dynamics in Saccharomyces cerevisiae.G3 (Bethesda, Md.) · 2013Article
- Article
- 3-D DNA methylation phenotypes correlate with cytotoxicity levels in prostate and liver cancer cell models.BMC pharmacology & toxicology · 2013Article
- Quantitative epigenetic co-variation in CpG islands and co-regulation of developmental genes.Scientific reports · 2013Article
- Genome-wide incorporation dynamics reveal distinct categories of turnover for the histone variant H3.3.Genome biology · 2013Article
- Insights into the regenerative property of plant cells and their receptivity to transgenesis: wheat as a research case study.Plant signaling & behavior · 2012Review
- Dynamic nucleosome-depleted regions at androgen receptor enhancers in the absence of ligand in prostate cancer cells.Molecular and cellular biology · 2011Article
- DNA methylation topology: potential of a chromatin landmark for epigenetic drug toxicology.Epigenomics · 2011Review
- A barcode screen for epigenetic regulators reveals a role for the NuB4/HAT-B histone acetyltransferase complex in histone turnover.PLoS genetics · 2011Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
2 authors.
Funding
Abstract
Traditional methods for epigenomic analysis provide a static picture of chromatin, which is actually a highly dynamic assemblage. Recent approaches have allowed direct measurements of chromatin dynamics, providing deeper insights into processes such as transcription, DNA replication and epigenetic inheritance.
Indexed as
Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.