Evidence map›Paper›PMID 20956557›Full record

ArticleMolecular and cellular biology2011

Splicing factor Cwc22 is required for the function of Prp2 and for the spliceosome to escape from a futile pathway.

Tzu-Chi Yeh, Hseuh-Lien Liu, Che-Sheng Chung, Nan-Ying Wu, Yen-Chi Liu, Soo-Chen Cheng

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 41 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Arresting Spliceosome Intermediates at Various Stages of the Splicing Pathway.Methods in molecular biology (Clifton, N.J.) · 2023
    Article
  6. Article
  7. Review
  8. Article
  9. The exon junction complex as a node of post-transcriptional networks.Nature reviews. Molecular cell biology · 2016
    Review
  10. Review
  11. Dramatically reduced spliceosome in Cyanidioschyzon merolae.Proceedings of the National Academy of Sciences of the United States of America · 2015
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Tzu-Chi YehInstitute of Molecular Biology, Academia Sinica, Taipei, Taiwan 115, Republic of China.
Hseuh-Lien Liu
Che-Sheng Chung
Nan-Ying Wu
Yen-Chi Liu
Soo-Chen Cheng
Beijing Chao-Yang Hospital · CNInstitute of Molecular Biology, Academia Sinica · TWNational Defense Medical Center · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cwc22 was previously identified to associate with the pre-mRNA splicing factor Cef1/Ntc85, a component of the Prp19-associated complex (nineteen complex [NTC]) involved in spliceosome activation. We show here that Cwc22 is required for pre-mRNA splicing both in vivo and in vitro but is neither tightly associated with the NTC nor required for spliceosome activation. Cwc22 is associated with the spliceosome prior to catalytic steps and remains associated throughout the reaction. The stable association of Cwc22 with the spliceosome requires the presence of the NTC but is independent of Prp2. Although Cwc22 is not required for the recruitment of Prp2 to the spliceosome, it is essential for the function of Prp2 in promoting the release of the U2 components SF3a and SF3b. In the absence of Cwc22, Prp2 can bind to the spliceosome but is dissociated upon ATP hydrolysis without promoting the release of SF3a/b. Thus, Cwc22 represents a novel ATP-dependent step one factor besides Prp2 and Spp2 and has a distinct role from that of Spp2 in mediating the function of Prp2.

Indexed as

Adenosine TriphosphateAmino Acid SequenceBase SequenceConserved SequenceDEAD-box RNA HelicasesDNA, FungalGenes, FungalModels, BiologicalMolecular Sequence DataRNA-Binding ProteinsRNA SplicingRNA Splicing FactorsSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsSequence DeletionSequence Homology, Amino AcidAdenosine TriphosphateCEF1 protein, S cerevisiaeCWC22 protein, S cerevisiaeDEAD-box RNA HelicasesDNA, FungalPRP19 protein, S cerevisiaePRP2 protein, S cerevisiaeRNA-Binding ProteinsRNA Splicing FactorsSaccharomyces cerevisiae ProteinsSpp382 protein, S cerevisiae

Identifiers

PMID20956557
PMCPMC3019855
OpenAlexW2135536812

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.