Evidence map›Paper›PMID 20956357›Full record

ArticleMolecular pharmacology2011

Iron chelators of the di-2-pyridylketone thiosemicarbazone and 2-benzoylpyridine thiosemicarbazone series inhibit HIV-1 transcription: identification of novel cellular targets--iron, cyclin-dependent kinase (CDK) 2, and CDK9.

Zufan Debebe, Tatyana Ammosova, Denitra Breuer, David B Lovejoy, Danuta S Kalinowski, Krishna Kumar, Marina Jerebtsova, Patricio Ray, Fatah Kashanchi, Victor R Gordeuk and 2 more

Erratum issuedOpen access · bronzeAbstract readComparative Study
In one paragraph

Article in Molecular pharmacology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 42 papers.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed, 68 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Review
  9. Review
  10. Observational
  11. Specific ActivationJournal of virology · 2019
    Article
  12. Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. Investigation of the salicylaldehyde thiosemicarbazone scaffold for inhibition of influenza virus PA endonuclease.Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry · 2015
    Article
  19. Article
  20. Discovery of novel 5-fluoro-MedChemComm · 2015
    Article
4 · The record

Corrections and comments

  • Erratum issued
    Karla, Pradeep K [removed]
5 · Who and what money

Authors and funding

12 authors at 4 institutions in 2 countries.

Zufan DebebeCenter for Sickle Cell Disease, Department of Medicine, Howard University, Washington DC 20001, USA.
Tatyana Ammosova
Denitra Breuer
David B Lovejoy
Danuta S Kalinowski
Krishna Kumar
Marina Jerebtsova
Patricio Ray
Fatah Kashanchi
Victor R Gordeuk
Des R Richardson
Sergei Nekhai
Howard University · USUniversity of Sydney · AUChildren's National · USGeorge Mason University · US

Funding

STRUCTURAL/FUNCTIONAL CHARACTERIZATION OF AMINOGLYCOSIDEG12RR003048 · NCRR · HOWARD UNIVERSITY · PI SOUTHERLAND, WILLIAM M. · 1985 to 2011
$19.0M
UVDM01RR010284 · NCRR · HOWARD UNIVERSITY · PI TAYLOR, ROBERT E. · 1996 to 2010
$17.4M
Role of bFGF low affinity receptors in childhood HIVANR01DK049419 · NIDDK · UNIVERSITY OF VIRGINIA · PI PATRICIO E. RAY · 1994 to 2026
$7.4M
Pathogenesis of HIV-HUS in childrenR01HL055605 · NHLBI · CHILDREN'S RESEARCH INSTITUTE · PI RAY, PATRICIO E. · 1995 to 2012
$4.3M
Howard University Research Scientist AwardR25HL003679 · NHLBI · HOWARD UNIVERSITY · PI NEKHAI, SERGEI · 2005 to 2009
$1.7M
Regulation of HIV-1 Transcription by CDK2SC1GM082325 · NIGMS · HOWARD UNIVERSITY · PI NEKHAI, SERGEI · 2008 to 2011
$1.2M
Iron and Vitamin E in Childhood HIV-Associated Renal DiseaseR21AT002278 · NCCIH · CHILDREN'S RESEARCH INSTITUTE · PI RAY, PATRICIO E. · 2005 to 2006
$410k
Effect of Iron Chelators on HIV-1 transcriptionF31HL090025 · NHLBI · HOWARD UNIVERSITY · PI DEBEBE, ZUFAN KEREGO · 2008 to 2011
$139k
NCCIH NIH HHS R21 AT002278NCCIH NIH HHS R21AT002278NCRR NIH HHS 2G12-RR003048NCRR NIH HHS 2M01-RR10284NCRR NIH HHS G12 RR003048NCRR NIH HHS M01 RR010284NHLBI NIH HHS 2R25-HL003679-08NHLBI NIH HHS F31 HL090025NHLBI NIH HHS F31-HL090025NHLBI NIH HHS R01 HL055605NHLBI NIH HHS R-1-HL55605NHLBI NIH HHS R25 HL003679NIDDK NIH HHS R01 DK049419NIDDK NIH HHS R01-DK49419NIGMS NIH HHS 1SC1-GM082325NIGMS NIH HHS SC1 GM082325
6 · The paper itself

Abstract

HIV-1 transcription is activated by HIV-1 Tat protein, which recruits cyclin-dependent kinase 9 (CDK9)/cyclin T1 and other host transcriptional coactivators to the HIV-1 promoter. Tat itself is phosphorylated by CDK2, and inhibition of CDK2 by small interfering RNA, the iron chelator 2-hydroxy-1-naphthylaldehyde isonicotinoyl hydrazone (311), and the iron chelator deferasirox (ICL670) inhibits HIV-1 transcription. Here we have analyzed a group of novel di-2-pyridylketone thiosemicarbazone- and 2-benzoylpyridine thiosemicarbazone-based iron chelators that exhibit marked anticancer activity in vitro and in vivo (Proc Natl Acad Sci USA 103:7670-7675, 2006; J Med Chem 50:3716-3729, 2007). Several of these iron chelators, in particular 2-benzoylpyridine 4-allyl-3-thiosemicarbazone (Bp4aT) and 2-benzoylpyridine 4-ethyl-3-thiosemicarbazone (Bp4eT), inhibited HIV-1 transcription and replication at much lower concentrations than did 311 and ICL670. Neither Bp4aT nor Bp4eT were toxic after a 24-h incubation. However, longer incubations for 48 h or 72 h resulted in cytotoxicity. Analysis of the molecular mechanism of HIV-1 inhibition showed that the novel iron chelators inhibited basal HIV-1 transcription, but not the nuclear factor-κB-dependent transcription or transcription from an HIV-1 promoter with inactivated SP1 sites. The chelators inhibited the activities of CDK2 and CDK9/cyclin T1, suggesting that inhibition of CDK9 may contribute to the inhibition of HIV-1 transcription. Our study suggests the potential usefulness of Bp4aT or Bp4eT in antiretroviral regimens, particularly where resistance to standard treatment occurs.

Indexed as

Cells, CulturedCyclin-Dependent Kinase 2Cyclin-Dependent Kinase 9HEK293 CellsHIV-1HumansIronIron Chelating AgentsThiosemicarbazonesTranscription, Genetic2-benzoylpyridine 4-ethyl-3-thiosemicarbazoneCDK2 protein, humanCyclin-Dependent Kinase 2Cyclin-Dependent Kinase 9di-2-pyridylketone-4,4-dimethyl-3-thiosemicarbazoneIronIron Chelating AgentsThiosemicarbazones

Identifiers

PMID20956357
PMCPMC3014282
OpenAlexW2114844276

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.