Evidence map›Paper›PMID 20953188›Full record

ArticleNature genetics2010

Genome-wide association study identifies a psoriasis susceptibility locus at TRAF3IP2.

Eva Ellinghaus, David Ellinghaus, Philip E Stuart, Rajan P Nair, Sophie Debrus, John V Raelson, Majid Belouchi, Hélène Fournier, Claudia Reinhard, Jun Ding and 23 more

Abstract read
In one paragraph

Article in Nature genetics, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 187 papers, 17 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
187citing papers in PubMed, 17 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

187 citing papers in PubMed, 17 syntheses or guidelines pooled it.

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  12. Association of IL23R polymorphisms with psoriasis and psoriatic arthritis: a meta-analysis.Inflammation research : official journal of the European Histamine Research Society ... [et al.] · 2012
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127 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

33 authors.

Eva EllinghausInstitute of Clinical Molecular Biology, Christian-Albrechts-University, Kiel, Germany.
David Ellinghaus
Philip E Stuart
Rajan P Nair
Sophie Debrus
John V Raelson
Majid Belouchi
Hélène Fournier
Claudia Reinhard
Jun Ding
Yun Li
Trilokraj Tejasvi
Johann Gudjonsson
Stefan W Stoll
John J Voorhees
Sylviane Lambert
Stephan Weidinger
Bernadette Eberlein
Manfred Kunz
Proton Rahman
Dafna D Gladman
Christian Gieger
H Erich Wichmann
Tom H Karlsen
Gabriele Mayr
Mario Albrecht
Dieter Kabelitz
Ulrich Mrowietz
Gonçalo R Abecasis
James T Elder
Stefan Schreiber
Michael Weichenthal
Andre Franke

Funding

Linkage analysis of familial psoriasis(Supplement)R01AR042742 · NIAMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI ELDER, JAMES TILFORD · 1994 to 2021
$10.1M
Identification of Psoriatic Arthritis Genes in the MHCR01AR050511 · NIAMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI ELDER, JAMES TILFORD · 2004 to 2013
$4.2M
Combined Analysis of Gene Expression and DNA Variation in PsoriasisR01AR054966 · NIAMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI ELDER, JAMES TILFORD · 2007 to 2011
$3.2M
NIAMS NIH HHS R01 AR042742NIAMS NIH HHS R01 AR050511NIAMS NIH HHS R01-AR050511NIAMS NIH HHS R01 AR054966NIAMS NIH HHS R01-AR054966NIAMS NIH HHS R01-AR42742
6 · The paper itself

Abstract

Psoriasis is a multifactorial skin disease characterized by epidermal hyperproliferation and chronic inflammation, the most common form of which is psoriasis vulgaris (PsV). We present a genome-wide association analysis of 2,339,118 SNPs in 472 PsV cases and 1,146 controls from Germany, with follow-up of the 147 most significant SNPs in 2,746 PsV cases and 4,140 controls from three independent replication panels. We identified an association at TRAF3IP2 on 6q21 and genotyped two SNPs at this locus in two additional replication panels (the combined discovery and replication panels consisted of 6,487 cases and 8,037 controls; combined P = 2.36 × 10⁻¹⁰ for rs13210247 and combined P = 1.24 × 10⁻¹⁶ for rs33980500). About 15% of psoriasis cases develop psoriatic arthritis (PsA). A stratified analysis of our datasets including only PsA cases (1,922 cases compared to 8,037 controls, P = 4.57 × 10⁻¹² for rs33980500) suggested that TRAF3IP2 represents a shared susceptibility for PsV and PsA. TRAF3IP2 encodes a protein involved in IL-17 signaling and which interacts with members of the Rel/NF-κB transcription factor family.

Indexed as

Adaptor Proteins, Signal TransducingArthritis, PsoriaticChromosomes, Human, Pair 6Diseases in TwinsGenetic Predisposition to DiseaseGenome-Wide Association StudyGenotypeGermanyHLA-C AntigensHumansInterleukinsPolymorphism, Single NucleotidePsoriasisSiblingsTumor Necrosis Factor Receptor-Associated Peptides and ProteinsWhite PeopleAdaptor Proteins, Signal TransducingHLA-C AntigensInterleukinsTRAF3IP2 protein, humanTumor Necrosis Factor Receptor-Associated Peptides and Proteins

Identifiers

PMID20953188
PMCPMC3136364

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.