Evidence map›Paper›PMID 20953187›Full record

ArticleNature genetics2010

Association analyses identify six new psoriasis susceptibility loci in the Chinese population.

Liang-Dan Sun, Hui Cheng, Zai-Xing Wang, An-Ping Zhang, Pei-Guang Wang, Jin-Hua Xu, Qi-Xing Zhu, Hai-Sheng Zhou, Eva Ellinghaus, Fu-Ren Zhang and 57 more

Open access · greenAbstract read
In one paragraph

Article in Nature genetics, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 156 papers, 16 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
156citing papers in PubMed, 16 pooled it
11.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

156 citing papers in PubMed, 16 syntheses or guidelines pooled it, 315 citations in OpenAlex.

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  3. Genetic variant inAnnals of medicine · 2021
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  4. Associations betweenBioMed research international · 2021
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  13. Association of IL23R polymorphisms with psoriasis and psoriatic arthritis: a meta-analysis.Inflammation research : official journal of the European Histamine Research Society ... [et al.] · 2012
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96 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

67 authors at 14 institutions in 3 countries.

Liang-Dan SunInstitute of Dermatology and Department of Dermatology at No.1 Hospital, Anhui Medical University, Hefei, Anhui, China.
Hui Cheng
Zai-Xing Wang
An-Ping Zhang
Pei-Guang Wang
Jin-Hua Xu
Qi-Xing Zhu
Hai-Sheng Zhou
Eva Ellinghaus
Fu-Ren Zhang
Xiong-Ming Pu
Xue-Qin Yang
Jian-Zhong Zhang
Ai-E Xu
Ri-Na Wu
Li-Min Xu
Lin Peng
Cynthia A Helms
Yun-Qing Ren
Chi Zhang
Shu-Mei Zhang
Rajan P Nair
Hong-Yan Wang
Guo-Shu Lin
Philip E Stuart
Xing Fan
Gang Chen
Trilokraj Tejasvi
Pan Li
Jun Zhu
Zhi-Ming Li
Hong-Mei Ge
Michael Weichenthal
Wen-Zheng Ye
Cheng Zhang
Song-Ke Shen
Bao-Qi Yang
Yuan-Yuan Sun
Shan-Shan Li
Yan Lin
Jian-Hua Jiang
Cun-Tao Li
Ri-Xin Chen
Juan Cheng
Xin Jiang
Peng Zhang
Wei-Min Song
Jin Tang
Hao-Qin Zhang
Li Sun
Jing Cui
Li-Jun Zhang
Biao Tang
Fei Huang
Qian Qin
Xiao-Ping Pei
Ai-Min Zhou
Li-Mei Shao
Jian-Lan Liu
Feng-Yu Zhang
Wei-Dong Du
Andre Franke
Anne M Bowcock
James T Elder
Jian-Jun Liu
Sen Yang
Xue-Jun Zhang
Anhui Medical University · CNUniversity of Michigan–Ann Arbor · USWashington University in St. Louis · USKiel University · DEMinistry of Education of the People's Republic of China · CNShanghai Changzheng Hospital · CNAir Force General Hospital PLA · CNFudan University · CNInner Mongolia Medical College Hospital · CNPeking University · CNPeople's Hospital of Xinjiang Uygur Autonomous Region · CNShandong Provincial Institute of Dermatology and Venereology · CNThird People's Hospital of Hangzhou · CNUniversity of Lübeck · DE

Funding

Linkage analysis of familial psoriasis(Supplement)R01AR042742 · NIAMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI ELDER, JAMES TILFORD · 1994 to 2021
$10.1M
Genome-Wide SNP Association in PsoriasisR01AR050266 · NIAMS · WASHINGTON UNIVERSITY · PI BOWCOCK, ANNE MARY · 2007 to 2016
$5.7M
Identification of Psoriatic Arthritis Genes in the MHCR01AR050511 · NIAMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI ELDER, JAMES TILFORD · 2004 to 2013
$4.2M
Combined Analysis of Gene Expression and DNA Variation in PsoriasisR01AR054966 · NIAMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI ELDER, JAMES TILFORD · 2007 to 2011
$3.2M
Design Approaches for Sequencing Disease-Associated Regions in PsoriasisU01HG005924 · NHGRI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI ELDER, JAMES TILFORD · 2010 to 2010
$221k
NHGRI NIH HHS U01 HG005924NIAMS NIH HHS R01 AR042742NIAMS NIH HHS R01 AR050266NIAMS NIH HHS R01AR050266NIAMS NIH HHS R01 AR050511NIAMS NIH HHS R01AR050511NIAMS NIH HHS R01 AR054966NIAMS NIH HHS R01AR054966NIAMS NIH HHS R01AR42742
6 · The paper itself

Abstract

We extended our previous genome-wide association study for psoriasis with a multistage replication study including 8,312 individuals with psoriasis (cases) and 12,919 controls from China as well as 3,293 cases and 4,188 controls from Germany and the United States and 254 nuclear families from the United States. We identified six new susceptibility loci associated with psoriasis in the Chinese study containing the candidate genes ERAP1, PTTG1, CSMD1, GJB2, SERPINB8 and ZNF816A (combined P < 5 × 10⁻⁸) and replicated one locus, 5q33.1 (TNIP1-ANXA6), previously reported (combined P = 3.8 × 10⁻²¹) in the European studies. Two of these loci showed evidence for association in the German study at ZNF816A and GJB2 with P = 3.6 × 10⁻³ and P = 7.9 × 10⁻³, respectively. ERAP1 and ZNF816A were associated with type 1 (early onset) psoriasis in the Chinese Han population (test for heterogeneity P = 6.5 × 10⁻³ and P = 1.5 × 10⁻³, respectively). Comparisons with the results of previous GWAS of psoriasis highlight the heterogeneity of disease susceptibility between the Chinese and European populations. Our study identifies new genetic susceptibility factors and suggests new biological pathways in psoriasis.

Indexed as

Genetic Predisposition to DiseaseGenome-Wide Association StudyPolymorphism, Single NucleotideAminopeptidasesAsian PeopleConnexin 26ConnexinsDNA ReplicationGermanyHumansMembrane ProteinsMinor Histocompatibility AntigensNeoplasm ProteinsPsoriasisSecurinSerpinsAminopeptidasesConnexin 26ConnexinsCSMD1 protein, humanERAP1 protein, humanGJB2 protein, humanMembrane ProteinsMinor Histocompatibility AntigensNeoplasm Proteinspituitary tumor-transforming protein 1, humanSecurinSERPINB8 protein, humanSerpinsTumor Suppressor Proteins

Identifiers

PMID20953187
PMCPMC3140436
OpenAlexW2049572499

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.