Evidence map›Paper›PMID 20952644›Full record

ArticleApplied and environmental microbiology2010

Occurrence, survival, and persistence of human adenoviruses and F-specific RNA phages in raw groundwater.

Leslie Ogorzaly, Isabelle Bertrand, Myriam Paris, Armand Maul, Christophe Gantzer

Abstract read
In one paragraph

Article in Applied and environmental microbiology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed.

  1. Trial
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  11. Recovery of Nucleic Acids of Enteric Viruses and Host-SpecificApplied and environmental microbiology · 2021
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  18. Quantification of human adenovirus and norovirus in river water in the north-east of France.Environmental science and pollution research international · 2018
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Leslie OgorzalyLCPME, Laboratoire de Chimie Physique et Microbiologie pour l'Environnement, Nancy-Université, CNRS, Faculté de Pharmacie, 5 Rue Albert Lebrun, 54000 Nancy, France.
Isabelle Bertrand
Myriam Paris
Armand Maul
Christophe Gantzer

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Detection of specific genetic markers can rapidly identify the presence of enteric viruses in groundwater. However, comparison of stability characteristics between genetic and infectivity markers is necessary to better interpret molecular data. Human adenovirus serotype 2 (HAdV2), in conjunction with MS2 phages or GA phages, was spiked into raw groundwater microcosms. Viral stability was periodically assessed by both infectivity and real-time PCR methods. The results of this yearlong study suggest that adenoviruses have the most stable persistence profile and an ability to survive for a long time in groundwater. According to a linear regression model, infectivity reductions of HAdV2 ranged from 0.0076 log(10)/day (4°C) to 0.0279 log(10)/day (20°C) and were significantly lower than those observed for phages. No adenoviral genome degradation was observed at 4°C, and the reduction was estimated at 0.0036 log(10)/day at 20°C. Occurrence study showed that DNA of human adenoviruses could be observed in groundwater from a confined aquifer (7 of the 60 samples were positive by real-time PCR), while no fecal indicators were detected. In agreement with the persistence of genetic markers, the presence of adenoviral DNA in groundwater may be misleading in term of health risk, especially in the absence of information on the infective status.

Indexed as

Soil MicrobiologyWater MicrobiologyAdenoviruses, HumanHumansMicrobial ViabilityPolymerase Chain ReactionRNA PhagesTime FactorsViral Plaque Assay

Identifiers

PMID20952644
PMCPMC3008255

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.