Evidence map›Paper›PMID 20952582›Full record

ArticleEukaryotic cell2010

Functional characterization of a new member of the Cdk9 family in Aspergillus nidulans.

Friederike Bathe, Claudia Kempf, Stephen A Osmani, Aysha H Osmani, Sabrina Hettinger, Elke Wohlmann, Reinhard Fischer

Open access · diamondAbstract read
In one paragraph

Article in Eukaryotic cell, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.1field-weighted citation impact, top 45% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Friederike BatheKarlsruhe Institute of Technology, Institute of Applied Life Sciences, Microbiology, Hertzstr. 16, 76187 Karlsruhe, Germany. friederike.bathe@mbio.uka.de
Claudia Kempf
Stephen A Osmani
Aysha H Osmani
Sabrina Hettinger
Elke Wohlmann
Reinhard Fischer
The Ohio State University · USKarlsruhe Institute of Technology · DE

Funding

The role of the NIMA kinase in mitotic regulationR01GM042564 · NIGMS · WEIS CENTER FOR RESEARCH-GEISINGER CLINC · PI OSMANI, STEPHEN A · 1989 to 2013
$4.3M
NIGMS NIH HHS GM042564NIGMS NIH HHS R01 GM042564
6 · The paper itself

Abstract

Cdk9-like kinases in complex with T-type cyclins are essential components of the eukaryotic transcription elongation machinery. The full spectrum of Cdk9/cyclin T targets, as well as the specific consequences of phosphorylations, is still largely undefined. We identify and characterize here a Cdk9 kinase (PtkA) in the filamentous ascomycete Aspergillus nidulans. Deletion of ptkA had a lethal effect in later stages of vegetative growth and completely impeded asexual development. Overexpression of ptkA affected directionality of polarized growth and the initiation of new branching sites. A green fluorescent protein-tagged PtkA version localized inside the nucleus during interphase, supporting a role of PtkA in transcription elongation, as observed in other organisms. We also identified a putative cyclin T homolog, PchA, in the A. nidulans genome and confirmed its interaction with PtkA in vivo. Surprisingly, the Pcl-like cyclin PclA, previously described to be involved in asexual development, was also found to interact with PtkA, indicating a possible role of PtkA in linking transcriptional activity with development and/or morphogenesis in A. nidulans. This is the first report of a Cdk9 kinase interacting with a Pcl-like cyclin, revealing interesting new aspects about the involvement of this Cdk-subfamily in differential gene expression.

Indexed as

Amino Acid SequenceAspergillus nidulansCyclin-Dependent Kinase 9Cyclin TFungal ProteinsMolecular Sequence DataMultigene FamilySequence AlignmentCyclin-Dependent Kinase 9Cyclin TFungal Proteins

Identifiers

PMID20952582
PMCPMC3008270
OpenAlexW2154453511

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.