Evidence map›Paper›PMID 20949223›Full record

ArticleOrganic & biomolecular chemistry2010

Understanding the DNA binding of novel non-symmetrical guanidinium/2-aminoimidazolinium derivatives.

Padraic S Nagle, Susan J Quinn, John M Kelly, Daniel H O'Donovan, Amir R Khan, Fernando Rodriguez, Binh Nguyen, W David Wilson, Isabel Rozas

Abstract read
In one paragraph

Article in Organic & biomolecular chemistry, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. Synthesis and Biophysical and Biological Studies ofJournal of medicinal chemistry · 2023
    Article
  3. 30th Annual GPPharmaceuticals (Basel, Switzerland) · 2023
    Article
  4. PhenQE8, a Novel Ligand of the Human Telomeric Quadruplex.International journal of molecular sciences · 2021
    Article
  5. Article
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Padraic S NagleSchool of Chemistry, University of Dublin, Trinity College, Dublin 2, Ireland.
Susan J Quinn
John M Kelly
Daniel H O'Donovan
Amir R Khan
Fernando Rodriguez
Binh Nguyen
W David Wilson
Isabel Rozas

Funding

Heterocycle Cation Recognition of the DNA Minor Groove.R01AI064200 · NIAID · GEORGIA STATE UNIVERSITY · PI WILSON, W DAVID · 2005 to 2014
$3.4M
NIAID NIH HHS AI 064200NIAID NIH HHS R01 AI064200
6 · The paper itself

Abstract

Biophysical studies have been carried out on a family of asymmetric guanidinium-based diaromatic derivatives to assess their potential as DNA minor groove binding agents. To experimentally assess the binding of these compounds to DNA, solution phase biophysical studies have been performed. Thus, surface plasmon resonance, UV-visible spectroscopy and circular and linear dichroism have been utilized to evaluate binding constants, stoichiometry and mode of binding. In addition, the thermodynamics of the binding process have been determined by using isothermal titration calorimetry. These results show significant DNA binding affinity that correlates with the expected 1 : 1 binding ratio usually observed for minor groove binders. Moreover, a simple computational approach has been devised to assess the potential as DNA binders of this family of compounds.

Indexed as

AminesDNAGuanidineImidazolesMolecular StructureSurface Plasmon ResonanceAminesDNAGuanidineimidazoleImidazoles

Identifiers

PMID20949223
PMCPMC3860747

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.