Evidence map›Paper›PMID 20949065›Full record

ArticlePLoS pathogens2010

Crystal structure of Legionella DotD: insights into the relationship between type IVB and type II/III secretion systems.

Noboru Nakano, Tomoko Kubori, Miki Kinoshita, Katsumi Imada, Hiroki Nagai

Abstract read
In one paragraph

Article in PLoS pathogens, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed.

  1. Review
  2. Comparative Analysis of T4SS Molecular Architectures.Journal of microbiology and biotechnology · 2023
    Review
  3. Article
  4. Journal of clinical medicine · 2022
    Review
  5. Microorganisms · 2022
    Review
  6. Review
  7. Article
  8. Article
  9. Review
  10. Bacteria-Killing Type IV Secretion Systems.Frontiers in microbiology · 2019
    Review
  11. Review
  12. Review
  13. Article
  14. Native structure of a type IV secretion system core complex essential for Legionella pathogenesis.Proceedings of the National Academy of Sciences of the United States of America · 2014
    Article
  15. Article
  16. Article
  17. Article
  18. Review
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Noboru NakanoResearch Institute for Microbial Diseases, Osaka University, Suita, Osaka, Japan.
Tomoko Kubori
Miki Kinoshita
Katsumi Imada
Hiroki Nagai

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Dot/Icm type IVB secretion system (T4BSS) is a pivotal determinant of Legionella pneumophila pathogenesis. L. pneumophila translocate more than 100 effector proteins into host cytoplasm using Dot/Icm T4BSS, modulating host cellular functions to establish a replicative niche within host cells. The T4BSS core complex spanning the inner and outer membranes is thought to be made up of at least five proteins: DotC, DotD, DotF, DotG and DotH. DotH is the outer membrane protein; its targeting depends on lipoproteins DotC and DotD. However, the core complex structure and assembly mechanism are still unknown. Here, we report the crystal structure of DotD at 2.0 Å resolution. The structure of DotD is distinct from that of VirB7, the outer membrane lipoprotein of the type IVA secretion system. In contrast, the C-terminal domain of DotD is remarkably similar to the N-terminal subdomain of secretins, the integral outer membrane proteins that form substrate conduits for the type II and the type III secretion systems (T2SS and T3SS). A short β-segment in the otherwise disordered N-terminal region, located on the hydrophobic cleft of the C-terminal domain, is essential for outer membrane targeting of DotH and Dot/Icm T4BSS core complex formation. These findings uncover an intriguing link between T4BSS and T2SS/T3SS.

Indexed as

Amino Acid SequenceBacterial ProteinsBacterial Secretion SystemsCrystallographyLegionella pneumophilaMembrane ProteinsModels, BiologicalModels, MolecularMolecular Sequence DataProtein ConformationProtein Structure, TertiarySecretinSequence Homology, Amino AcidBacterial ProteinsBacterial Secretion SystemsMembrane ProteinsSecretin

Identifiers

PMID20949065
PMCPMC2951367

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.