Evidence map›Paper›PMID 20946849›Full record

ArticleMethods in enzymology2010

High-throughput screening of bacterial protein localization.

John N Werner, Zemer Gitai

Abstract read
In one paragraph

Article in Methods in enzymology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.2field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 8 citations in OpenAlex.

  1. High-Throughput Imaging of Bacillus subtilis.Methods in molecular biology (Clifton, N.J.) · 2022
    Article
  2. Article
  3. Article
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

John N WernerDepartment of Molecular Biology, Princeton University, Princeton, New Jersey, USA.
Zemer Gitai
Princeton University · US

Funding

Discovering Antibiotic Drugs & Targets via High-Throughput Bacterial Cell BiologyDP2OD004389 · OD · PRINCETON UNIVERSITY · PI GITAI, ZEMER · 2008 to 2008
$2.4M
Host Factors Required for Dengue and Yellow Fever Virus AmplificationR21AI102187 · NIAID · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI CRISTEA, ILEANA M., THOMPSON, SUNNIE R · 2012 to 2013
$414k
Global analysis of Caulobacter protein localizationF32AI073043 · NIAID · PRINCETON UNIVERSITY · PI WERNER, JOHN N · 2007 to 2009
$148k
NIAID NIH HHS 1F32AI073043-01A1NIAID NIH HHS F32 AI073043NIAID NIH HHS R21 AI102187NIH HHS 1DP2OD004389-01NIH HHS DP2 OD004389
6 · The paper itself

Abstract

The ever-increasing number of sequenced genomes and subsequent sequence-based analysis has provided tremendous insight into cellular processes; however, the ability to experimentally manipulate this genomic information in the laboratory requires the development of new high-throughput methods. To translate this genomic information into information on protein function, molecular and cell biological techniques are required. One strategy to gain insight into protein function is to observe where each specific protein is subcellularly localized. We have developed a pipeline of methods that allows rapid, efficient, and scalable gene cloning, imaging, and image analysis. This work focuses on a high-throughput screen of the Caulobacter crescentus proteome to identify proteins with unique subcellular localization patterns. The cloning, imaging, and image analysis techniques described here are applicable to any organism of interest.

Indexed as

Bacterial ProteinsCaulobacter crescentusEscherichia coliGenetic VectorsBacterial Proteins

Identifiers

PMID20946849
PMCPMC4566148
OpenAlexW1574739026

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.