Evidence map›Paper›PMID 20944219›Full record

ArticleActa crystallographica. Section F, Structural biology and crystallization communications2010

The structure of KPN03535 (gi|152972051), a novel putative lipoprotein from Klebsiella pneumoniae, reveals an OB-fold.

Debanu Das, Piotr Kozbial, Gye Won Han, Dennis Carlton, Lukasz Jaroszewski, Polat Abdubek, Tamara Astakhova, Herbert L Axelrod, Constantina Bakolitsa, Connie Chen and 43 more

Open access · hybridAbstract read
In one paragraph

Article in Acta crystallographica. Section F, Structural biology and crystallization communications, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact, top 87% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 2 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

53 authors at 7 institutions in 1 country.

Debanu DasStanford Synchrotron Radiation Lightsource, SLAC National Accelerator Laboratory, Menlo Park,California, USA.
Piotr Kozbial
Gye Won Han
Dennis Carlton
Lukasz Jaroszewski
Polat Abdubek
Tamara Astakhova
Herbert L Axelrod
Constantina Bakolitsa
Connie Chen
Hsiu Ju Chiu
Michelle Chiu
Thomas Clayton
Marc C Deller
Lian Duan
Kyle Ellrott
Marc André Elsliger
Dustin Ernst
Carol L Farr
Julie Feuerhelm
Anna Grzechnik
Joanna C Grant
Kevin K Jin
Hope A Johnson
Heath E Klock
Mark W Knuth
S Sri Krishna
Abhinav Kumar
David Marciano
Daniel McMullan
Mitchell D Miller
Andrew T Morse
Edward Nigoghossian
Amanda Nopakun
Linda Okach
Silvya Oommachen
Jessica Paulsen
Christina Puckett
Ron Reyes
Christopher L Rife
Natasha Sefcovic
Henry J Tien
Christine B Trame
Henry van den Bedem
Dana Weekes
Tiffany Wooten
Qingping Xu
Keith O Hodgson
John Wooley
Ashley M Deacon
Adam Godzik
Scott A Lesley
Ian A Wilson
Joint Center for Structural Genomics · USGenomics Institute of the Novartis Research Foundation · USStanford Synchrotron Radiation Lightsource · USScripps Research Institute · USSLAC National Accelerator Laboratory · USUniversity of California, San Diego · USSanford Burnham Prebys Medical Discovery Institute · US

Funding

Technology Evaluation CoreU54GM074898 · NIGMS · SCRIPPS RESEARCH INSTITUTE, THE · PI STEVENS, RAYMOND C · 2005 to 2009
$50.6M
NIGMS NIH HHS U54 GM074898
6 · The paper itself

Abstract

KPN03535 (gi|152972051) is a putative lipoprotein of unknown function that is secreted by Klebsiella pneumoniae MGH 78578. The crystal structure reveals that despite a lack of any detectable sequence similarity to known structures, it is a novel variant of the OB-fold and structurally similar to the bacterial Cpx-pathway protein NlpE, single-stranded DNA-binding (SSB) proteins and toxins. K. pneumoniae MGH 78578 forms part of the normal human skin, mouth and gut flora and is an opportunistic pathogen that is linked to about 8% of all hospital-acquired infections in the USA. This structure provides the foundation for further investigations into this divergent member of the OB-fold family.

Indexed as

Amino Acid SequenceBacterial ProteinsCrystallography, X-RayKlebsiella pneumoniaeLipoproteinsModels, MolecularMolecular Sequence DataProtein FoldingProtein Structure, TertiaryBacterial ProteinsLipoproteins

Identifiers

PMID20944219
PMCPMC2954213
OpenAlexW2067524151

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.