Evidence map›Paper›PMID 20944216›Full record

ArticleActa crystallographica. Section F, Structural biology and crystallization communications2010

Structure of an essential bacterial protein YeaZ (TM0874) from Thermotoga maritima at 2.5 Å resolution.

Qingping Xu, Daniel McMullan, Lukasz Jaroszewski, S Sri Krishna, Marc André Elsliger, Andrew P Yeh, Polat Abdubek, Tamara Astakhova, Herbert L Axelrod, Dennis Carlton and 24 more

Open access · hybridAbstract read
In one paragraph

Article in Acta crystallographica. Section F, Structural biology and crystallization communications, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
0.8field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
  2. Conservation and Diversification of tRNA tInternational journal of molecular sciences · 2022
    Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

34 authors at 7 institutions in 1 country.

Qingping XuStanford Synchrotron Radiation Lightsource, SLAC National Accelerator Laboratory, Menlo Park, CA, USA.
Daniel McMullan
Lukasz Jaroszewski
S Sri Krishna
Marc André Elsliger
Andrew P Yeh
Polat Abdubek
Tamara Astakhova
Herbert L Axelrod
Dennis Carlton
Hsiu Ju Chiu
Thomas Clayton
Lian Duan
Julie Feuerhelm
Joanna Grant
Gye Won Han
Kevin K Jin
Heath E Klock
Mark W Knuth
Mitchell D Miller
Andrew T Morse
Edward Nigoghossian
Linda Okach
Silvya Oommachen
Jessica Paulsen
Ron Reyes
Christopher L Rife
Henry van den Bedem
Keith O Hodgson
John Wooley
Ashley M Deacon
Adam Godzik
Scott A Lesley
Ian A Wilson
Joint Center for Structural Genomics · USSLAC National Accelerator Laboratory · USGenomics Institute of the Novartis Research Foundation · USUniversity of California, San Diego · USStanford Synchrotron Radiation Lightsource · USSanford Burnham Prebys Medical Discovery Institute · USScripps Research Institute · US

Funding

Technology Evaluation CoreU54GM074898 · NIGMS · SCRIPPS RESEARCH INSTITUTE, THE · PI STEVENS, RAYMOND C · 2005 to 2009
$50.6M
JOINT CENTER FOR STRUCTURAL GENOMICSP50GM062411 · NIGMS · SCRIPPS RESEARCH INSTITUTE · PI WILSON, IAN A · 2000 to 2004
$32.9M
NIGMS NIH HHS P50 GM062411NIGMS NIH HHS P50 GM62411NIGMS NIH HHS U54 GM074898
6 · The paper itself

Abstract

YeaZ is involved in a protein network that is essential for bacteria. The crystal structure of YeaZ from Thermotoga maritima was determined to 2.5 Å resolution. Although this protein belongs to a family of ancient actin-like ATPases, it appears that it has lost the ability to bind ATP since it lacks some key structural features that are important for interaction with ATP. A conserved surface was identified, supporting its role in the formation of protein complexes.

Indexed as

Amino Acid SequenceBacterial ProteinsCrystallography, X-RayModels, MolecularMolecular Sequence DataProtein Structure, QuaternaryProtein Structure, TertiarySequence AlignmentThermotoga maritimaBacterial Proteins

Identifiers

PMID20944216
PMCPMC2954210
OpenAlexW2044277337

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.