Evidence map›Paper›PMID 20943950›Full record

ArticleMolecular biology of the cell2010

Rubicon and PLEKHM1 negatively regulate the endocytic/autophagic pathway via a novel Rab7-binding domain.

Keisuke Tabata, Kohichi Matsunaga, Ayuko Sakane, Takuya Sasaki, Takeshi Noda, Tamotsu Yoshimori

Open access · greenAbstract read
In one paragraph

Article in Molecular biology of the cell, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 84 papers.

0numbers the graph read from it
0cells of the map it votes in
84citing papers in PubMed
3.3field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

84 citing papers in PubMed, 159 citations in OpenAlex.

  1. Regulation and roles of mammalian mitophagy.Nature reviews. Molecular cell biology · 2026
    Review
  2. Rubicon modulates neuroimmune responses following traumatic brain injury.bioRxiv : the preprint server for biology · 2026
    Article
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  14. Exosome regulation by Rubicon in ageing.Nature cell biology · 2024
    Article
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  17. Article
  18. Review
  19. Review
  20. Review

24 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Keisuke TabataDepartment of Genetics, Graduate School of Medicine, Osaka University, Osaka 565-0871, Japan.
Kohichi Matsunaga
Ayuko Sakane
Takuya Sasaki
Takeshi Noda
Tamotsu Yoshimori
The University of Osaka · JPTokushima University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The endocytic and autophagic pathways are involved in the membrane trafficking of exogenous and endogenous materials to lysosomes. However, the mechanisms that regulate these pathways are largely unknown. We previously reported that Rubicon, a Beclin 1-binding protein, negatively regulates both the autophagic and endocytic pathways by unidentified mechanisms. In this study, we performed database searches to identify potential Rubicon homologues that share the common C-terminal domain, termed the RH domain. One of them, PLEKHM1, the causative gene of osteopetrosis, also suppresses endocytic transport but not autophagosome maturation. Rubicon and PLEKHM1 specifically and directly interact with Rab7 via their RH domain, and this interaction is critical for their function. Furthermore, we show that Rubicon but not PLEKHM1 uniquely regulates membrane trafficking via simultaneously binding both Rab7 and PI3-kinase.

Indexed as

Adaptor Proteins, Signal TransducingApoptosis Regulatory ProteinsAutophagyAutophagy-Related ProteinsBeclin-1EndocytosisHeLa CellsHumansImmunoblottingIntracellular Signaling Peptides and ProteinsLysosomesMembrane GlycoproteinsMembrane ProteinsMembrane Transport ModulatorsMicroscopy, FluorescencePhosphatidylinositol 3-KinasesAdaptor Proteins, Signal TransducingApoptosis Regulatory ProteinsAutophagy-Related ProteinsBeclin-1BECN1 protein, humanIntracellular Signaling Peptides and ProteinsMembrane GlycoproteinsMembrane ProteinsMembrane Transport ModulatorsPhosphatidylinositol 3-KinasesPLEKHM1 protein, humanrab7 GTP-Binding Proteinsrab7 GTP-binding proteins, humanrab GTP-Binding ProteinsRUBCN protein, human

Identifiers

PMID20943950
PMCPMC2993745
OpenAlexW2053282493

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.