Evidence map›Paper›PMID 20943866›Full record

ArticleJournal of clinical microbiology2010

Genetic evolution of the Spanish multidrug-resistant Salmonella enterica 4,5,12:i:- monophasic variant.

Lorena Laorden, Silvia Herrera-León, Ilargi Martínez, Ainhoa Sanchez, Lefteris Kromidas, Joseba Bikandi, Aitor Rementeria, Aurora Echeita, Javier Garaizar

Abstract read
In one paragraph

Article in Journal of clinical microbiology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed.

  1. Article
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  4. Genotyping Study ofMicroorganisms · 2020
    Article
  5. Article
  6. Emergence and Dissemination ofMicroorganisms · 2019
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Lorena LaordenDepartment of Immunology, Microbiology, and Parasitology, Faculty of Pharmacy, University of the Basque Country, Paseo de la Universidad 7, 01006 Vitoria-Gasteiz, Spain.
Silvia Herrera-León
Ilargi Martínez
Ainhoa Sanchez
Lefteris Kromidas
Joseba Bikandi
Aitor Rementeria
Aurora Echeita
Javier Garaizar

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We analyzed a collection of 60 Salmonella enterica 4,5,12:i:- phage type U302 multidrug-resistant monophasic variant strains, isolated in Spain between 2000 and 2007. Most strains showed resistance to ampicillin (A), chloramphenicol (C), sulfamethoxazole (Su), gentamicin (G), streptomycin (S), tetracycline (T), and co-trimoxazole (SxT) (an ACSuGSTSxT resistance pattern). Only one pulsed-field gel electrophoresis (PFGE) type was detected, with 19 subtypes (Simpson's index of diversity [SID]=0.89). Multiple-locus variable-number tandem-repeat analysis (MLVA) showed more variability, with 32 profiles (SID=0.97), but only showed diversity at the STTR5 and STTR6 loci. PCR and sequencing demonstrated all strains contained the same allantoin-glyoxylate pathway deletion. Four types of deletions were detected in the fljAB operon, all starting at the same position, at the STM2758 gene, and followed by an IS26 insertion. Furthermore, a representative set of strains of the four deletion types harbored plasmids with IS26. We propose that a Salmonella enterica serotype Typhimurium U302 multidrug-resistant (ACSuGSTSxT) strain, defective for the allantoin-glyoxylate pathway and containing IS26 at plasmid pU302L, could be the ancestor of the variant in Spain.

Indexed as

Drug Resistance, Multiple, BacterialEvolution, MolecularAllantoinAnti-Bacterial AgentsBacterial Typing TechniquesBacteriophage TypingBiosynthetic PathwaysDNA Transposable ElementsElectrophoresis, Gel, Pulsed-FieldGene DeletionGlyoxylatesHumansMinisatellite RepeatsMolecular Sequence DataMolecular TypingMutagenesis, InsertionalAllantoinAnti-Bacterial AgentsDNA Transposable ElementsGlyoxylatesglyoxylic acid

Identifiers

PMID20943866
PMCPMC3008487

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.