Evidence map›Paper›PMID 20943750›Full record

ArticleHuman molecular genetics2011

The Opdc missense mutation of Pax2 has a milder than loss-of-function phenotype.

Sally H Cross, Lisa McKie, Katrine West, Emma L Coghill, Jack Favor, Shoumo Bhattacharya, Steve D M Brown, Ian J Jackson

Open access · hybridAbstract read
In one paragraph

Article in Human molecular genetics, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
0.9field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Three NewNeuro-ophthalmology (Aeolus Press) · 2017
    Article
  5. Article
  6. Review
  7. Article
  8. Association between graves' disease and renal coloboma syndrome: a case report.Clinical pediatric endocrinology : case reports and clinical investigations : official journal of the Japanese Society for Pediatric Endocrinology · 2013
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Scanning thin-sheet laser imaging microscopy elucidates details on mouse ear development.Developmental dynamics : an official publication of the American Association of Anatomists · 2012
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Sally H CrossMRC Human Genetics Unit, Institute of Genetics and Molecular Medicine, Edinburgh, UK. sally.cross@hgu.mrc.ac.uk
Lisa McKie
Katrine West
Emma L Coghill
Jack Favor
Shoumo Bhattacharya
Steve D M Brown
Ian J Jackson
MRC Institute of Genetics and Molecular Medicine · GBMary Lyon Centre at MRC Harwell · GBCentre for Human Genetics · GBHelmholtz Zentrum München · DE

Funding

British Heart Foundation RG/10/17/28553Medical Research Council MC_PC_U127561112Medical Research Council MC_U127561112Medical Research Council MC_U142684172Medical Research Council MC_U142684175Wellcome Trust
6 · The paper itself

Abstract

Renal-coloboma syndrome, also known as papillorenal syndrome, is an autosomal dominant human disorder in which optic disc coloboma is associated with kidney abnormalities. Mutations in the paired domain transcription factor PAX2 have been found to be the underlying cause of this disease. Disease severity varies between patients, and in some cases, renal hypoplasia has been found in the absence of any retinal defects. Here we report an N-ethyl-N-nitrosourea-induced mouse mutation, Opdc, which is an isoleucinetothreonine missense mutation, I40T, in the first α-helix of the Pax2 paired domain. The mutant protein binds target DNA sequences less strongly than the wild-type protein and acts poorly to transactivate target promoters in culture. The phenotypic consequence of this mutation on the development of the eye and ear is similar to that reported for null alleles of Pax2. However, in homozygotes, cerebellar development is normal on a genetic background in which loss of Pax2 results in failure of cerebellar formation. Moreover, there is a genetic background effect on the heterozygous phenotype such that on some strain backgrounds, kidney development is unaffected. Opdc is the first hypomorphic mutation reported for Pax2 that differs in phenotype from loss-of-function mutations. These results suggest that PAX2 is a strong candidate gene for cases in which human patients have optic disc coloboma not associated with renal dysplasia.

Indexed as

Mutation, MissensePhenotypeAbnormalities, MultipleAnimalsColobomaDNA-Binding ProteinsGene Expression Regulation, DevelopmentalGenotypeHumansMiceMice, Inbred BALB CMice, Inbred C3HMice, Inbred C57BLModels, AnimalPAX2 Transcription FactorPoint MutationDNA-Binding ProteinsPAX2 Transcription Factor

Identifiers

PMID20943750
PMCPMC3005898
OpenAlexW2143880939

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.