Evidence map›Paper›PMID 20943659›Full record

ArticleThe Journal of biological chemistry2010

The 1.5 Å crystal structure of human receptor for advanced glycation endproducts (RAGE) ectodomains reveals unique features determining ligand binding.

Hajeung Park, Floyd G Adsit, Jeffrey C Boyington

Erratum issuedOpen access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 75 papers.

0numbers the graph read from it
0cells of the map it votes in
75citing papers in PubMed
7.2field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

75 citing papers in PubMed, 150 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Review
  5. Modulation of Aging Diseases via RAGE Targets: A Dietary Intervention Review.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2025
    Review
  6. Virtual Probing on the Influence of CaCell biochemistry and biophysics · 2025
    Article
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  8. Article
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  18. Review
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15 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

  • Erratum issued
    Adsit, Floyd G [added]
5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Hajeung ParkLaboratory of Structural Biology, NIEHS, National Institutes of Health, Research Triangle Park, North Carolina 27709, USA. hajpark@scripps.edu
Floyd G Adsit
Jeffrey C Boyington
National Institute of Environmental Health Sciences · USNational Institutes of Health · US

Funding

Intramural NIH HHS
6 · The paper itself

Abstract

Interaction of the pattern recognition receptor, RAGE with key ligands such as advanced glycation end products (AGE), S100 proteins, amyloid β, and HMGB1 has been linked to diabetic complications, inflammatory and neurodegenerative disorders, and cancer. To help answer the question of how a single receptor can recognize and respond to a diverse set of ligands we have investigated the structure and binding properties of the first two extracellular domains of human RAGE, which are implicated in various ligand binding and subsequent signaling events. The 1.5-Å crystal structure reveals an elongated molecule with a large basic patch and a large hydrophobic patch, both highly conserved. Isothermal titration calorimetry (ITC) and deletion experiments indicate S100B recognition by RAGE is an entropically driven process involving hydrophobic interaction that is dependent on Ca(2+) and on residues in the C'D loop (residues 54-67) of domain 1. In contrast, competition experiments using gel shift assays suggest that RAGE interaction with AGE is driven by the recognition of negative charges on AGE-proteins. We also demonstrate that RAGE can bind to dsDNA and dsRNA. These findings reveal versatile structural features of RAGE that help explain its ability to recognize of multiple ligands.

Indexed as

Crystallography, X-RayDNAHumansHydrophobic and Hydrophilic InteractionsLigandsNerve Growth FactorsProtein BindingProtein Structure, TertiaryReceptor for Advanced Glycation End ProductsRNA, Double-StrandedS100 Calcium Binding Protein beta SubunitS100 ProteinsStructure-Activity RelationshipDNALigandsNerve Growth FactorsReceptor for Advanced Glycation End ProductsRNA, Double-StrandedS100B protein, humanS100 Calcium Binding Protein beta SubunitS100 Proteins

Identifiers

PMID20943659
PMCPMC3003376
OpenAlexW2048700535

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.