Evidence map›Paper›PMID 20938764›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2011

Fine mapping and candidate gene analysis of ptgms2-1, the photoperiod-thermo-sensitive genic male sterile gene in rice (Oryza sativa L.).

Jianjun Xu, Baohe Wang, Yinhui Wu, Peina Du, Jun Wang, Man Wang, Chuandeng Yi, Minghong Gu, Guohua Liang

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Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

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3 · Its place in the literature

Who cites it

26 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
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  5. Article
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  7. Article
  8. Review
  9. Article
  10. The Cds.71 onFrontiers in plant science · 2020
    Article
  11. Article
  12. Article
  13. Characterization and Rapid Gene-Mapping of Leaf Lesion Mimic Phenotype ofInternational journal of molecular sciences · 2019
    Article
  14. Identification of candidate genes underlying genic male-sterile msc-1 locus via genome resequencing in Capsicum annuum L.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2018
    Article
  15. Review
  16. Fine mapping of the genic male-sterile msTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2018
    Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

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5 · Who and what money

Authors and funding

9 authors.

Jianjun XuJiangsu Key Laboratory of Crop Genetics and Physiology/Key Laboratory of the Ministry of Education for Plant Functional Genomics, Yangzhou University, 88 Daxue Road, 225009, Yangzhou, Jiangsu Province, People's Republic of China.
Baohe Wang
Yinhui Wu
Peina Du
Jun Wang
Man Wang
Chuandeng Yi
Minghong Gu
Guohua Liang

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Photoperiod-thermo-sensitive genic male sterile (PTGMS) rice exhibits a number of desirable traits for hybrid rice production. The cloning genes responsible for PTGMS and those elucidating male sterility mechanisms and reversibility to fertility would be of great significance to provide a foundation to develop new male sterile lines. Guangzhan63S, a PTGMS line, is one of the most widely used indica two-line hybrid rice breeding systems in China. In this study, genetic analysis based on F(2) and BC(1)F(2) populations derived from a cross between Guangzhan63S and 1587, determined a single recessive gene controls male sterility in Guangzhan63S. Molecular marker techniques combined with bulked-segregant analysis (BSA) were used and located the target gene (named ptgms2-1) between two SSR markers RM12521 and RM12823. Fine mapping of the ptgms2-1 locus was conducted with 45 new Insertion-Deletion (InDel) markers developed between the RM12521 and RM12823 region, using 634 sterile individuals from F(2) and BC(1)F(2) populations. Ptgms2-1 was further mapped to a 50.4 kb DNA fragment between two InDel markers, S2-40 and S2-44, with genetic distances of 0.08 and 0.16 cM, respectively, which cosegregated with S2-43 located on the AP004039 BAC clone. Ten genes were identified in this region based on annotation results from the RiceGAAS system. A nuclear ribonuclease Z gene was identified as the candidate for the ptgms2-1 gene. This result will facilitate cloning the ptgms2-1 gene. The tightly linked markers for the ptgms2-1 gene locus will further provide a useful tool for marker-assisted selection of this gene in rice breeding programs.

Indexed as

Genes, PlantPlant InfertilityBase SequenceChinaChromosome MappingChromosome SegregationCrops, AgriculturalCrosses, GeneticMolecular Sequence AnnotationMolecular Sequence DataOryzaPhotoperiodRibonucleasesRibonucleases

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.