Evidence map›Paper›PMID 20937113›Full record

ArticleBMC genomics2010

Genome-wide expression patterns in physiological cardiac hypertrophy.

Ignat Drozdov, Sophia Tsoka, Christos A Ouzounis, Ajay M Shah

Abstract read
In one paragraph

Article in BMC genomics, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Review
  6. Article
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  10. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Ignat DrozdovKing's College London (KCL) BHF Centre of Research Excellence - Cardiovascular Division - School of Medicine - James Black Centre - 125 Coldharbour Lane, London, UK.
Sophia Tsoka
Christos A Ouzounis
Ajay M Shah

Funding

British Heart Foundation CH//9900British Heart Foundation RE/08/003British Heart Foundation RG/08/011/25922
6 · The paper itself

Abstract

backgroundGenome-wide expression patterns in physiological cardiac hypertrophy. Co-expression patterns in physiological cardiac hypertrophy

resultsIn this study, the first large-scale analysis of publicly available genome-wide expression data of several in vivo murine models of physiological LVH was carried out using network analysis. On evaluating 3 million gene co-expression patterns across 141 relevant microarray experiments, it was found that physiological adaptation is an evolutionarily conserved processes involving preservation of the function of cytochrome c oxidase, induction of autophagy compatible with cell survival, and coordinated regulation of angiogenesis.

conclusionThis analysis not only identifies known biological pathways involved in physiological LVH, but also offers novel insights into the molecular basis of this phenotype by identifying key networks of co-expressed genes, as well as their topological and functional properties, using relevant high-quality microarray experiments and network inference.

Indexed as

Gene Expression RegulationAnimalsCardiomegalyCluster AnalysisConserved SequenceDatabases, GeneticEvolution, MolecularGene Regulatory NetworksGenomeMiceModels, GeneticOligonucleotide Array Sequence Analysis

Identifiers

PMID20937113
PMCPMC3091706

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.