Evidence map›Paper›PMID 20929726›Full record

ArticleScience (New York, N.Y.)2010

Structures of the CXCR4 chemokine GPCR with small-molecule and cyclic peptide antagonists.

Beili Wu, Ellen Y T Chien, Clifford D Mol, Gustavo Fenalti, Wei Liu, Vsevolod Katritch, Ruben Abagyan, Alexei Brooun, Peter Wells, F Christopher Bi and 5 more

Abstract read
In one paragraph

Article in Science (New York, N.Y.), 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 878 papers.

0numbers the graph read from it
0cells of the map it votes in
878citing papers in PubMed
102.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

878 citing papers in PubMed, 1,753 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Review
  9. Article
  10. Article
  11. Structure basis for C-C chemokine receptor 4 modulation by orthosteric and allosteric antagonists.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. Article

818 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

15 authors at 1 institution in 1 country.

Beili WuDepartment of Molecular Biology, The Scripps Research Institute, 10550 North Torrey Pines Road, La Jolla, CA 92037, USA.
Ellen Y T Chien
Clifford D Mol
Gustavo Fenalti
Wei Liu
Vsevolod Katritch
Ruben Abagyan
Alexei Brooun
Peter Wells
F Christopher Bi
Damon J Hamel
Peter Kuhn
Tracy M Handel
Vadim Cherezov
Raymond C Stevens
Scripps Research Institute · US

Funding

JCSG Center:Innovative Membrane Protein Technology (RMI)P50GM073197 · NIGMS · SCRIPPS RESEARCH INSTITUTE, THE · PI STEVENS, RAYMOND C · 2004 to 2013
$26.8M
Sub-project 5U54GM074961 · NIGMS · EMERALD BIOSTRUCTURES · PI STEWART, LANCE J · 2005 to 2009
$19.3M
Project 3U54GM094618 · NIGMS · UNIVERSITY OF SOUTHERN CALIFORNIA · PI STEVENS, RAYMOND C · 2010 to 2014
$17.1M
STRUCTURE OF MACROPHAGE CHEMOTACTIC ACTIVATING PROTEINSR01AI037113 · NIAID · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI HANDEL, TRACY M · 1995 to 2015
$5.2M
Macromolecular DockingR01GM071872 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI ABAGYAN, RUBEN · 2004 to 2017
$4.2M
Molecular Mechanism of Allosteric Modulation of the Oxytocin Receptor by SterolsR01GM089857 · NIGMS · UNIVERSITY OF SOUTHERN CALIFORNIA · PI CHEREZOV, VADIM · 2010 to 2014
$1.7M
Membrane Proteins. Crystallogenesis/X-ray Structure(RMI)R01GM075915 · NIGMS · UNIVERSITY OF LIMERICK · PI CAFFREY, MARTIN D. · 2005 to 2009
$984k
Engineering Chemokine Receptor Signaling Complexes In VitroR01GM081763 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI HANDEL, TRACY M · 2009 to 2011
$935k
Stabilization of CXCR4 and its complexes for high resolution structural studiesR21AI087189 · NIAID · SCRIPPS RESEARCH INSTITUTE, THE · PI CHEREZOV, VADIM, ZHANG, QINGHAI · 2009 to 2010
$522k
Automated Pre-screening System for in meso Membrane protein crystallizationR21RR025336 · NCRR · SCRIPPS RESEARCH INSTITUTE, THE · PI CHEREZOV, VADIM · 2010 to 2011
$472k
Nanodisc Reconstitution and Characterization of Chemokine ReceptorsF32GM083463 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI HAMEL, DAMON JUSTIN · 2008 to 2010
$138k
NCI NIH HHS Y1-CO-1020NCRR NIH HHS R21 RR025336NIAID NIH HHS R01 AI037113NIAID NIH HHS R21 AI087189NIGMS NIH HHS F32 GM083463NIGMS NIH HHS GM075915NIGMS NIH HHS P50 GM073197NIGMS NIH HHS R01 GM071872NIGMS NIH HHS R01 GM075915NIGMS NIH HHS R01 GM081763NIGMS NIH HHS R01 GM089857NIGMS NIH HHS U54 GM074961NIGMS NIH HHS U54 GM094618NIGMS NIH HHS Y1-GM-1104
6 · The paper itself

Abstract

Chemokine receptors are critical regulators of cell migration in the context of immune surveillance, inflammation, and development. The G protein-coupled chemokine receptor CXCR4 is specifically implicated in cancer metastasis and HIV-1 infection. Here we report five independent crystal structures of CXCR4 bound to an antagonist small molecule IT1t and a cyclic peptide CVX15 at 2.5 to 3.2 angstrom resolution. All structures reveal a consistent homodimer with an interface including helices V and VI that may be involved in regulating signaling. The location and shape of the ligand-binding sites differ from other G protein-coupled receptors and are closer to the extracellular surface. These structures provide new clues about the interactions between CXCR4 and its natural ligand CXCL12, and with the HIV-1 glycoprotein gp120.

Indexed as

AnimalsCell LineChemokine CXCL12Crystallography, X-RayHIV Envelope Protein gp120HumansMembrane ProteinsModels, MolecularProtein BindingProtein ConformationProtein MultimerizationReceptors, CXCR4Recombinant ProteinsSpodopteraThioureaChemokine CXCL12HIV Envelope Protein gp120Membrane ProteinsReceptors, CXCR4Recombinant ProteinsRTL8C protein, humanThiourea

Identifiers

PMID20929726
PMCPMC3074590
OpenAlexW2152853006

What OpenQuestion holds

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LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.