Evidence map›Paper›PMID 20923231›Full record

ArticleBiochemistry2010

The association−dissociation behavior of the ApoE proteins: kinetic and equilibrium studies.

Kanchan Garai, Carl Frieden

Abstract read
In one paragraph

Article in Biochemistry, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
2.8field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 72 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. ApoE Isoforms Inhibit Amyloid Aggregation of Proinflammatory Protein S100A9.International journal of molecular sciences · 2024
    Article
  5. Article
  6. Apolipoprotein E4 has extensive conformational heterogeneity in lipid-free and lipid-bound forms.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  7. Review
  8. Science translational medicine · 2021
    Article
  9. Article
  10. Functional insights from biophysical study of TREM2 interactions with apoE and AβAlzheimer's & dementia : the journal of the Alzheimer's Association · 2020
    Article
  11. ApoE Lipidation as a Therapeutic Target in Alzheimer's Disease.International journal of molecular sciences · 2020
    Review
  12. APOE in the normal brain.Neurobiology of disease · 2020
    Review
  13. Article
  14. Article
  15. Article
  16. Protein oligomerization as a metabolic control mechanism: Application to apoE.Protein science : a publication of the Protein Society · 2019
    Article
  17. Article
  18. Article
  19. Article
  20. A mechanism for lipid binding to apoE and the role of intrinsically disordered regions coupled to domain-domain interactions.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Kanchan GaraiDepartment of Biochemistry and Molecular Biophysics, Washington University School of Medicine, St. Louis, MO 63110, USA.
Carl Frieden
Washington University in St. Louis · US

Funding

METABOLIC REGULATION AND INTERACTING ENZYME SYSTEMSR01DK013332 · NIDDK · WASHINGTON UNIVERSITY · PI FRIEDEN, CARL · 1986 to 2008
$4.2M
METABOLIC REGULATION AND INTERACTING ENZYME SYSTEMSR37DK013332 · NIDDK · WASHINGTON UNIVERSITY · PI FRIEDEN, CARL · 1987 to 1994
–
NIDDK NIH HHS DK13332NIDDK NIH HHS R01 DK013332
6 · The paper itself

Abstract

The apolipoprotein E family consists of three major protein isoforms: apolipoprotein E4 (ApoE4), ApoE3, and ApoE2. The isoforms, which contain 299 residues, differ only by single-amino acid changes, but of the three, only ApoE4 is a risk factor for Alzheimer’s disease. At micromolar concentrations, lipid-free ApoE exists predominantly as tetramers. In more dilute solutions, lower-molecular mass species predominate. Using fluorescence correlation spectroscopy (FCS), intermolecular fluorescence resonance energy transfer (FRET), and sedimentation methods, we found that the association−dissociation reaction of ApoE can be modeled with a monomer−dimer−tetramer process. Equilibrium constants have been determined from the sedimentation data, while the individual rate constants for association and dissociation were determined by measurement of the kinetics of dissociation of ApoE and are in agreement with the equilibrium constants. Dissociation kinetics as measured by intermolecular FRET show two phases reflecting the dissociation of tetramer to dimer and of dimer to monomer, with dissociation from tetramer to dimer being more rapid than the dissociation from dimer to monomer. The rate constants differ for the different ApoE isoforms, showing that the association−dissociation process is isoform specific. Strikingly, the association rate constants are almost 2 orders of magnitude slower than expected for a diffusion-controlled process. Dissociation kinetics were also monitored by tryptophan fluorescence in the presence of acrylamide and the data found to be consistent with the monomer−dimer−tetramer model. The approach combining multiple methods establishes the reaction scheme of ApoE self-association.

Indexed as

Fluorescence Resonance Energy TransferAlzheimer DiseaseApolipoprotein E2Apolipoprotein E3Apolipoprotein E4Apolipoproteins EHumansKineticsProtein ConformationProtein IsoformsProtein MultimerizationSpectrometry, FluorescenceApolipoprotein E2Apolipoprotein E3Apolipoprotein E4Apolipoproteins EProtein Isoforms

Identifiers

PMID20923231
PMCPMC3038193
OpenAlexW2035467780

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.