Evidence map›Paper›PMID 20921362›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2010

Structures of aminoacylase 3 in complex with acetylated substrates.

Jennifer M Hsieh, Kirill Tsirulnikov, Michael R Sawaya, Nathaniel Magilnick, Natalia Abuladze, Ira Kurtz, Jeff Abramson, Alexander Pushkin

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Jennifer M HsiehDepartment of Chemistry and Biochemistry, University of California, Los Angeles, CA 90095, USA.
Kirill Tsirulnikov
Michael R Sawaya
Nathaniel Magilnick
Natalia Abuladze
Ira Kurtz
Jeff Abramson
Alexander Pushkin

Funding

Structures of sodium glucose transporters by cryo electron microscopyR01GM078844 · NIGMS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI ABRAMSON, JEFFREY S · 2006 to 2018
$5.3M
Biology of Mercapturic Acid Mediated NephrotoxicityR01ES012935 · NIEHS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI PUSHKIN, ALEXANDER · 2005 to 2009
$1.8M
Structure/Function Studies on the Ca2+: Cation Antiporter family of transportersR21HL093278 · NHLBI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI ABRAMSON, JEFFREY S · 2009 to 2010
$424k
Howard Hughes Medical InstituteNHLBI NIH HHS R21 HL093278NIEHS NIH HHS R01 ES012935NIGMS NIH HHS R01 GM078844
6 · The paper itself

Abstract

Trichloroethylene (TCE) is one of the most widespread environmental contaminants, which is metabolized to N-acetyl-S-1,2-dichlorovinyl-L-cysteine (NA-DCVC) before being excreted in the urine. Alternatively, NA-DCVC can be deacetylated by aminoacylase 3 (AA3), an enzyme that is highly expressed in the kidney, liver, and brain. NA-DCVC deacetylation initiates the transformation into toxic products that ultimately causes acute renal failure. AA3 inhibition is therefore a target of interest to prevent TCE induced nephrotoxicity. Here we report the crystal structure of recombinant mouse AA3 (mAA3) in the presence of its acetate byproduct and two substrates: N(α)-acetyl-L-tyrosine and NA-DCVC. These structures, in conjunction with biochemical data, indicated that AA3 mediates substrate specificity through van der Waals interactions providing a dynamic interaction interface, which facilitates a diverse range of substrates.

Indexed as

AcetylationAmidohydrolasesAnimalsBiocatalysisMiceModels, MolecularProtein ConformationSubstrate SpecificityAmidohydrolasesaminoacylase III, mouse

Identifiers

PMID20921362
PMCPMC2964198

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.