Evidence map›Paper›PMID 20921307›Full record

Trial reportAntimicrobial agents and chemotherapy2010

Population pharmacokinetic modeling of the association between 63396C->T pregnane X receptor polymorphism and unboosted atazanavir clearance.

Alessandro Schipani, Marco Siccardi, Antonio D'Avolio, Lorena Baietto, Marco Simiele, Stefano Bonora, Sonia Rodríguez Novoa, Lorena Cuenca, Vincent Soriano, Nitipatana Chierakul and 10 more

Abstract readClinical Trial
In one paragraph

Trial report in Antimicrobial agents and chemotherapy, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed, 1 pooled it
3.2field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 1 synthesis or guideline pooled it, 71 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors at 7 institutions in 4 countries.

Alessandro SchipaniDepartment of Pharmacology and Therapeutics, University of Liverpool, 70 Pembroke Place, Liverpool L69 3GF, United Kingdom.
Marco Siccardi
Antonio D'Avolio
Lorena Baietto
Marco Simiele
Stefano Bonora
Sonia Rodríguez Novoa
Lorena Cuenca
Vincent Soriano
Nitipatana Chierakul
Natpratou Saguenwong
Charoen Chuchuttaworn
Janelle M Hoskins
Anne M Dvorak
Howard L McLeod
Gerry Davies
Saye Khoo
David J Back
Giovanni Di Perri
Andrew Owen
University of Liverpool · GBOspedale Amedeo di Savoia · ITUniversity of North Carolina at Chapel Hill · USUniversity of Turin · ITBamrasnaradura Infectious Diseases Institute · THCentral Chest Institute of Thailand · THSiriraj Hospital · TH

Funding

POPULATION GENETICS AND DRUG METABOLISMU01GM063340 · NIGMS · WASHINGTON UNIVERSITY · PI MCLEOD, HOWARD L · 2001 to 2009
$17.4M
Medical Research Council G0800247NIGMS NIH HHS U01 GM063340NIGMS NIH HHS U01 GM63340
6 · The paper itself

Abstract

Atazanavir (ATV) plasma concentrations are influenced by CYP3A4 and ABCB1, which are regulated by the pregnane X receptor (PXR; NR1I2). PXR expression is correlated with CYP3A4 in liver in the absence of enzyme inducers. The PXR single nucleotide polymorphism (SNP) 63396C→T (rs2472677) alters PXR expression and CYP3A4 activity in vitro, and we previously showed an association of this polymorphism with unboosted ATV plasma concentrations. The aim of this study was to develop a population pharmacokinetic analysis to quantify the impact of 63396C→T and diurnal variation on ATV clearance. A population analysis was performed with 323 plasma samples from 182 randomly selected patients receiving unboosted ATV. Two hundred fifty-nine of the blood samples were collected at random time points, and 11 patients had a full concentration-time profile at steady state. Nonlinear mixed effects modeling was applied to explore the effects of PXR 63396C→T, patient demographics, and diurnal variation. A one-compartment model with first-order absorption and lag time best described the data. Population clearance was 19.7 liters/h with interpatient variability or coefficient of variation (CV) of 21.5%. Homozygosity for the T allele for PXR 63396 was associated with a 17.0% higher clearance that was statistically significant. Evening dosing was associated with 34% higher bioavailability than morning dosing. Patient demographic factors had no effect on ATV clearance. These data show an association of PXR 63396C→T and diurnal variation on unboosted ATV clearance. The association is likely to be mediated through an effect on hepatic PXR expression and therefore expression of its target genes (e.g., CYP3A4, SLCO1B1, and ABCB1), which are known to be involved in ATV clearance.

Indexed as

AdultAgedAtazanavir SulfateATP Binding Cassette Transporter, Subfamily BATP Binding Cassette Transporter, Subfamily B, Member 1Circadian RhythmCytochrome P-450 CYP3AFemaleGene FrequencyGenotypeHIV InfectionsHumansLiver-Specific Organic Anion Transporter 1MaleMiddle AgedOligopeptidesABCB1 protein, humanAtazanavir SulfateATP Binding Cassette Transporter, Subfamily BATP Binding Cassette Transporter, Subfamily B, Member 1CYP3A4 protein, humanCytochrome P-450 CYP3ALiver-Specific Organic Anion Transporter 1NR1I2 protein, humanOligopeptidesOrganic Anion TransportersPregnane X ReceptorPyridinesReceptors, SteroidSLCO1B1 protein, human

Identifiers

PMID20921307
PMCPMC2981241
OpenAlexW2145580268

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.