Evidence map›Paper›PMID 20920359›Full record

ArticleVirology journal2010

Viral replication is enhanced by an HIV-1 intersubtype recombination-derived Vpu protein.

Cristian De Candia, Constanza Espada, Gabriel Duette, Yanina Ghiglione, Gabriela Turk, Horacio Salomón, Mauricio Carobene

Open access · goldAbstract read
In one paragraph

Article in Virology journal, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.0field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Recombination in viruses: mechanisms, methods of study, and evolutionary consequences.Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases · 2015
    Review
  5. Article
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Cristian De CandiaNational Reference Center for AIDS, Department of Microbiology, School of Medicine, University of Buenos Aires, Buenos Aires, Argentina.
Constanza Espada
Gabriel Duette
Yanina Ghiglione
Gabriela Turk
Horacio Salomón
Mauricio Carobene
University of Buenos Aires · AR

Funding

Mount Sinai-New York State-Argentina HIV Prevention ProgramD43TW001037 · FIC · MOUNT SINAI SCHOOL OF MEDICINE OF NYU · PI INDYK, DEBBIE S · 2000 to 2011
$4.1M
FIC NIH HHS D43TW 001037
6 · The paper itself

Abstract

backgroundMultiple HIV-1 intersubtype recombinants have been identified in human populations. Previous studies from our lab group have shown that the epidemic in Argentina is characterized by the high prevalence of a circulating recombinant form, CRF12_BF, and many related BF recombinant forms. In these genomic structures a recombination breakpoint frequently involved the vpu coding region. Due to the scarce knowledge of Vpu participation in the virion release process and its impact on pathogenesis and of the functional capacities of intersubtype recombinant Vpu proteins, the aim of this work was to perform a comparative analysis on virion release capacity and relative replication capacity among viral variants harboring either a BF recombinant Vpu or a subtype B Vpu.

resultsOur results showed that BF recombinant Vpu was associated to an increased viral particles production when compared to WT B variant in tetherin-expressing cell lines. This observation was tested in the context of a competition assay between the above mentioned variants. The results showed that the replication of the BF Vpu-harboring variant was more efficient in cell cultures than subtype B, reaching a higher frequency in the viral population in a short period of time.

conclusionThis study showed that as a result of intersubtype recombination, a structurally re-organized HIV-1 Vpu has an improved in vitro capacity of enhancing viral replication, and provides evidence of the changes occurring in this protein function that could play an important role in the successful spread of intersubtype recombinant variants.

Indexed as

Recombination, GeneticVirus ReleaseVirus ReplicationCell LineHIV-1Human Immunodeficiency Virus ProteinsHumansViral LoadViral Regulatory and Accessory ProteinsViroporin ProteinsVirulence FactorsHuman Immunodeficiency Virus ProteinsViral Regulatory and Accessory ProteinsViroporin ProteinsVirulence Factorsvpu protein, Human immunodeficiency virus 1

Identifiers

PMID20920359
PMCPMC2967538
OpenAlexW2109733591

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.