Evidence map›Paper›PMID 20919746›Full record

ArticleJournal of biomolecular structure & dynamics2010

A conformationally constrained peptidomimetic binds to the extracellular region of HER2 protein.

Sashikanth Banappagari, Sharon Ronald, Seetharama D Satyanarayanajois

Open access · greenAbstract read
In one paragraph

Article in Journal of biomolecular structure & dynamics, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
3.0field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 44 citations in OpenAlex.

  1. Review
  2. Review
  3. Peptidomimetics in cancer targeting.Molecular medicine (Cambridge, Mass.) · 2022
    Review
  4. Article
  5. Article
  6. Journal of Cancer · 2020
    Article
  7. Article
  8. Article
  9. Article
  10. Homo- and Heterodimerization of Proteins in Cell Signaling: Inhibition and Drug Design.Advances in protein chemistry and structural biology · 2018
    Review
  11. Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Sashikanth BanappagariDepartment of Basic Pharmaceutical Sciences, College of Pharmacy, University of Louisiana at Monroe, Monroe, LA 71201, USA.
Sharon Ronald
Seetharama D Satyanarayanajois
University of Louisiana at Monroe · US

Funding

VISUAL AND ANALYTICAL TOOLS FOR CLUSTER ANALYSISP20RR016456 · NCRR · LOUISIANA STATE UNIV A&M COL BATON ROUGE · PI FENG, JUNE · 2001 to 2011
$28.7M
NCRR NIH HHS P20 RR016456NCRR NIH HHS P20RR016456
6 · The paper itself

Abstract

Human epidermal growth factor receptor 2 (HER2) is a member of the human epidermal growth factor receptor kinases (other members include EGFR or HER1, HER3, and HER4) that are involved in signaling cascades for cell growth and differentiation. It is well established that HER2-mediated heterodimerization has important implications in cancer. Deregulation of signaling pathways and overexpression of HER2 is known to occur in cancer cells, indicating a role of HER2 in tumorigenesis. Therefore, blocking HER2-mediated signaling has potential therapeutic value. We have designed several peptidomimetics to inhibit HER2-mediated signaling for cell growth. One of the compounds (HERP5, Arg-beta Naph-Phe) exhibited antiproliferative activity with IC(50) values in the micromolar-to-nanomolar range in breast cancer cell lines. Binding of fluorescently labeled HERP5 to HER2 protein was evaluated by fluorescence assay, microscopy, and circular dichroism spectroscopy. Results indicated that HERP5 binds to the extracellular region of the HER2 protein. Structure of the peptidomimetic HERP5 was studied by NMR and molecular dynamics simulations. Based on these results a model was proposed for HER2-EGFR dimerization and possible blocking by HERP5 peptidomimetic using a protein-protein docking method.

Indexed as

Protein ConformationAmino Acid SequenceBinding SitesCircular DichroismDimerizationErb-b2 Receptor Tyrosine KinasesErbB ReceptorsHumansModels, MolecularMolecular Dynamics SimulationMolecular Sequence DataMolecular StructureNuclear Magnetic Resonance, BiomolecularPeptidesProtein BindingSignal TransductionErb-b2 Receptor Tyrosine KinasesErbB ReceptorsPeptides

Identifiers

PMID20919746
PMCPMC3005560
OpenAlexW2082454765

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.