Evidence map›Paper›PMID 20890638›Full record

ArticleMolecular and cellular biochemistry2010

Expression, purification and ligand binding properties of the recombinant translation initiation factor (PeIF5B) from Pisum sativum.

Sheeba Rasheedi, Madhuri Suragani, Soghra K Haq, Sachchidanand, Rajesh Bhardwaj, Seyed E Hasnain, Nasreen Z Ehtesham

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Article in Molecular and cellular biochemistry, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.1field-weighted citation impact, top 47% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
  2. Mechanism of cytoplasmic mRNA translation.The arabidopsis book · 2015
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 1 country.

Sheeba RasheediDepartment of Biochemistry, University of Hyderabad, Hyderabad, India.
Madhuri Suragani
Soghra K Haq
Sachchidanand
Rajesh Bhardwaj
Seyed E Hasnain
Nasreen Z Ehtesham
National Institute of Nutrition · INUniversity of Hyderabad · INInstitute of Life Sciences · INJawaharlal Nehru Centre for Advanced Scientific Research · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Gene encoding a novel translation initiation factor PeIF5B from Pisum sativum with sequence similarity to eIF5B from H. sapiens, D. melanogaster, S. cerevisiae as well as archaeal aIF5B from M. thermoautotrophicum was earlier reported by us. We now describe the expression and purification of 96 kDa recombinant PeIF5B (rPeIF5B) protein. Using fluorescence and circular dichroism spectra analyses, we show that Mg(2+) binding does not lead to any change in PeIF5B aromatic amino acid micro-environment, whereas GTP binding induces significant changes in the local environment of the aromatic amino acids. However, the protein undergoes changes in secondary structure upon metal ion and nucleotide binding. Charged initiator tRNA binding to PeIF5B is found to be cofactor dependent. PeIF5B binds to GTP in vitro as evident from autoradiography. Based on homology modeling of the catalytic domain of PeIF5B, we could confirm the conformational changes in PeIF5B following ligand binding.

Indexed as

Recombinant ProteinsBase SequenceCircular DichroismDNA PrimersElectrophoresis, Polyacrylamide GelEukaryotic Initiation FactorsGuanosine TriphosphateLigandsMagnesiumModels, MolecularPisum sativumPolymerase Chain ReactionProtein BindingProtein ConformationRNA, TransferSpectrometry, FluorescenceDNA Primerseukaryotic initiation factor-5BEukaryotic Initiation FactorsGuanosine TriphosphateLigandsMagnesiumRecombinant ProteinsRNA, Transfer

Identifiers

PMID20890638
OpenAlexW1994624755

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.