Evidence map›Paper›PMID 20889975›Full record

ArticleThe Journal of biological chemistry2010

Low temperature dynamic mapping reveals unexpected order and disorder in troponin.

Devanand Kowlessur, Larry S Tobacman

Abstract read
In one paragraph

Article in The Journal of biological chemistry, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Devanand KowlessurDepartment of Medicine, University of Illinois at Chicago, Chicago, Illinois 60612, USA.
Larry S Tobacman

Funding

THIN FILAMENTS WITH CARDIOMYOPATHIC MUTANT PROTEINSR01HL063774 · NHLBI · UNIVERSITY OF IOWA · PI TOBACMAN, LARRY S · 2000 to 2014
$4.5M
CARDIAC CONTRACTILE PROTEIN COOPERATIVITYR01HL038834 · NHLBI · UNIVERSITY OF IOWA · PI TOBACMAN, LARRY S · 1992 to 2009
$3.6M
CARDIAC CONTRACTILE PROTEIN COOPERATIVITYR29HL038834 · NHLBI · UNIVERSITY OF IOWA · PI TOBACMAN, LARRY S · 1987 to 1991
–
NHLBI NIH HHS HL038834NHLBI NIH HHS HL063774NHLBI NIH HHS R01 HL038834NHLBI NIH HHS R01 HL063774
6 · The paper itself

Abstract

Troponin is a pivotal regulatory protein that binds Ca(2+) reversibly to act as the muscle contraction on-off switch. To understand troponin function, the dynamic behavior of the Ca(2+)-saturated cardiac troponin core domain was mapped in detail at 10 °C, using H/D exchange-mass spectrometry. The low temperature conditions of the present study greatly enhanced the dynamic map compared with previous work. Approximately 70% of assessable peptide bond hydrogens were protected from exchange sufficiently for dynamic measurement. This allowed the first characterization by this method of many regions of regulatory importance. Most of the TnI COOH terminus was protected from H/D exchange, implying an intrinsically folded structure. This region is critical to the troponin inhibitory function and has been implicated in thin filament activation. Other new findings include unprotected behavior, suggesting high mobility, for the residues linking the two domains of TnC, as well as for the inhibitory peptide residues preceding the TnI switch helix. These data indicate that, in solution, the regulatory subdomain of cardiac troponin is mobile relative to the remainder of troponin. Relatively dynamic properties were observed for the interacting TnI switch helix and TnC NH(2)-domain, contrasting with stable, highly protected properties for the interacting TnI helix 1 and TnC COOH-domain. Overall, exchange protection via protein folding was relatively weak or for a majority of peptide bond hydrogens. Several regions of TnT and TnI were unfolded even at low temperature, suggesting intrinsic disorder. Finally, change in temperature prominently altered local folding stability, suggesting that troponin is an unusually mobile protein under physiological conditions.

Indexed as

ActinsCalciumHumansKineticsModels, BiologicalMolecular ConformationPeptidesProtein ConformationProtein FoldingProtein Structure, TertiarySpectroscopy, Fourier Transform InfraredTemperatureTroponin CTroponin ITroponin TActinsCalciumPeptidesTroponin CTroponin ITroponin T

Identifiers

PMID20889975
PMCPMC2998147

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.