Evidence map›Paper›PMID 20889914›Full record

ArticleThe Plant cell2010

Provitamin A accumulation in cassava (Manihot esculenta) roots driven by a single nucleotide polymorphism in a phytoene synthase gene.

Ralf Welsch, Jacobo Arango, Cornelia Bär, Bertha Salazar, Salim Al-Babili, Jesús Beltrán, Paul Chavarriaga, Hernan Ceballos, Joe Tohme, Peter Beyer

Open access · bronzeAbstract read
In one paragraph

Article in The Plant cell, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 105 papers.

0numbers the graph read from it
0cells of the map it votes in
105citing papers in PubMed
5.7field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

105 citing papers in PubMed, 297 citations in OpenAlex.

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  15. Constitutive overexpression ofFrontiers in plant science · 2024
    Article
  16. Regulation of Carotenoid Biosynthesis and Degradation in Lettuce (International journal of molecular sciences · 2023
    Article
  17. Article
  18. Article
  19. Review
  20. Article

45 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 2 countries.

Ralf WelschUniversity of Freiburg, Faculty of Biology, Freiburg, Germany.
Jacobo Arango
Cornelia Bär
Bertha Salazar
Salim Al-Babili
Jesús Beltrán
Paul Chavarriaga
Hernan Ceballos
Joe Tohme
Peter Beyer
University of Freiburg · DEInternational Center for Tropical Agriculture · CO

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cassava (Manihot esculenta) is an important staple crop, especially in the arid tropics. Because roots of commercial cassava cultivars contain a limited amount of provitamin A carotenoids, both conventional breeding and genetic modification are being applied to increase their production and accumulation to fight vitamin A deficiency disorders. We show here that an allelic polymorphism in one of the two expressed phytoene synthase (PSY) genes is capable of enhancing the flux of carbon through carotenogenesis, thus leading to the accumulation of colored provitamin A carotenoids in storage roots. A single nucleotide polymorphism present only in yellow-rooted cultivars cosegregates with colored roots in a breeding pedigree. The resulting amino acid exchange in a highly conserved region of PSY provides increased catalytic activity in vitro and is able to increase carotenoid production in recombinant yeast and Escherichia coli cells. Consequently, cassava plants overexpressing a PSY transgene produce yellow-fleshed, high-carotenoid roots. This newly characterized PSY allele provides means to improve cassava provitamin A content in cassava roots through both breeding and genetic modification.

Indexed as

Alkyl and Aryl TransferasesAllelesAmino Acid SequenceAmino Acid SubstitutionDNA, PlantGene Expression Regulation, PlantGeranylgeranyl-Diphosphate GeranylgeranyltransferaseManihotMolecular Sequence DataPigmentationPlant RootsPlants, Genetically ModifiedPolymorphism, Single NucleotideSequence AlignmentVitamin AAlkyl and Aryl TransferasesDNA, PlantGeranylgeranyl-Diphosphate GeranylgeranyltransferaseVitamin A

Identifiers

PMID20889914
PMCPMC2990137
OpenAlexW2152182048

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.