Evidence map›Paper›PMID 20888479›Full record

ArticleMethods in enzymology2010

3D visualization of HIV virions by cryoelectron tomography.

Jun Liu, Elizabeth R Wright, Hanspeter Winkler

Abstract read
In one paragraph

Article in Methods in enzymology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed.

  1. Electron cryotomography reveals ultrastructure alterations in platelets from patients with ovarian cancer.Proceedings of the National Academy of Sciences of the United States of America · 2015
    Trial
  2. Review
  3. Review
  4. Review
  5. Review
  6. Cryo-EM structures of prefusion SIV envelope trimer.Nature structural & molecular biology · 2022
    Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Structural remodeling of bacteriophage T4 and host membranes during infection initiation.Proceedings of the National Academy of Sciences of the United States of America · 2015
    Article
  13. Visualization of the type III secretion sorting platform of Shigella flexneri.Proceedings of the National Academy of Sciences of the United States of America · 2015
    Article
  14. Review
  15. Cryoelectron tomography reveals the sequential assembly of bacterial flagella in Borrelia burgdorferi.Proceedings of the National Academy of Sciences of the United States of America · 2013
    Article
  16. Electron tomography of paracrystalline 2D arrays.Methods in molecular biology (Clifton, N.J.) · 2013
    Article
  17. Review
  18. Molecular architecture of chemoreceptor arrays revealed by cryoelectron tomography of Escherichia coli minicells.Proceedings of the National Academy of Sciences of the United States of America · 2012
    Article
  19. Article
  20. Morphogenesis of the Infectious HIV-1 Virion.Frontiers in microbiology · 2011
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Jun LiuDepartment of Pathology and Laboratory Medicine, University of Texas Medical School at Houston, Houston, Texas, USA.
Elizabeth R Wright
Hanspeter Winkler

Funding

Structure-Function Relationships in the Spirochetal Flagellar MotorR01AI087946 · NIAID · YALE UNIVERSITY · PI LIU, JUN · 2010 to 2025
$6.6M
Computational methods for molecular tomographyR01GM082948 · NIGMS · FLORIDA STATE UNIVERSITY · PI WINKLER, HANSPETER · 2007 to 2011
$1.3M
NIAID NIH HHS 1R01AI087946NIAID NIH HHS R01 AI087946NIGMS NIH HHS R01 GM082948
6 · The paper itself

Abstract

The structure of the human immunodeficiency virus (HIV) and some of its components have been difficult to study in three-dimensions (3D) primarily because of their intrinsic structural variability. Recent advances in cryoelectron tomography (cryo-ET) have provided a new approach for determining the 3D structures of the intact virus, the HIV capsid, and the envelope glycoproteins located on the viral surface. A number of cryo-ET procedures related to specimen preservation, data collection, and image processing are presented in this chapter. The techniques described herein are well suited for determining the ultrastructure of bacterial and viral pathogens and their associated molecular machines in situ at nanometer resolution.

Indexed as

CD4 AntigensCryoelectron MicroscopyElectron Microscope Tomographygag Gene Products, Human Immunodeficiency VirusHIVHIV Envelope Protein gp120VirionCD4 Antigensgag Gene Products, Human Immunodeficiency VirusHIV Envelope Protein gp120

Identifiers

PMID20888479
PMCPMC3056484

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.