Evidence map›Paper›PMID 20886216›Full record

ArticleMammalian genome : official journal of the International Mammalian Genome Society2010

QTL analysis of measures of mouse home-cage activity using B6/MSM consomic strains.

Akinori Nishi, Ayako Ishii, Aki Takahashi, Toshihiko Shiroishi, Tsuyoshi Koide

Abstract readComparative Study
In one paragraph

Article in Mammalian genome : official journal of the International Mammalian Genome Society, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Age Dependence of Systemic Bone Loss and Recovery Following Femur Fracture in Mice.Journal of bone and mineral research : the official journal of the American Society for Bone and Mineral Research · 2019
    Article
  5. Article
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  7. Article
  8. Article
  9. Article
  10. Genetic determinants of voluntary exercise.Trends in genetics : TIG · 2013
    Review
  11. Chromosome substitution strains: gene discovery, functional analysis, and systems studies.Mammalian genome : official journal of the International Mammalian Genome Society · 2012
    Review
  12. Forward genetic approaches to understanding complex behaviors.Current topics in behavioral neurosciences · 2012
    Review
  13. Article
  14. Parkinson's disease mouse models in translational research.Mammalian genome : official journal of the International Mammalian Genome Society · 2011
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Akinori NishiMouse Genomics Resource Laboratory, National Institute of Genetics, 1111 Yata, Mishima, Shizuoka, 411-0801, Japan.
Ayako Ishii
Aki Takahashi
Toshihiko Shiroishi
Tsuyoshi Koide

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The activity of mice in their home cage is influenced greatly by the cycle of light and dark. In addition, home-cage activity shows remarkable time-dependent changes that result in a prominent temporal pattern. The wild-derived mouse strain MSM/Ms (MSM) exhibits higher total activity in the home cage than does C57BL/6 (B6), a commonly used laboratory strain. In addition, there is a clear strain difference in the temporal pattern of home-cage activity. This study aimed to clarify the genetic basis of strain differences in the temporal pattern of home-cage activity between MSM and B6. Through the comparison of temporal patterns of home-cage activity between B6 and MSM, the pattern can be classified into five temporal components: (1) resting phase, (2) anticipation phase, (3) 1st phase, (4) 2nd phase, and (5) 3rd phase. To identify quantitative trait loci (QTLs) involved in these temporal components, we used consomic strains established from crosses between B6 and MSM. Five consomic strains, for Chrs 2T (telomere), 3, 4, 13, and 14, showed significantly higher total activity than B6. In contrast, the consomic strains of Chrs 6C (centromere), 7T, 9, 11, and 15 were less active than B6. This indicates that multigenic factors regulate the total activity. Further analysis showed an impact of QTLs on the temporal components of home-cage activity. The present data showed that each temporal component was regulated by different combinations of multigenic factors, with some overlap. These temporal component-related QTLs are important to understand fully the genetic mechanisms that underlie home-cage activity.

Indexed as

Chromosome MappingQuantitative Trait LociAnimalsBehavior, AnimalCausalityCircadian ClocksCrosses, GeneticMatched-Pair AnalysisMiceMice, CongenicMice, Inbred C57BLMice, Inbred StrainsMotor ActivityPhysical Exertion

Identifiers

PMID20886216
PMCPMC2974199

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LicenceCC BY-NC
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.