Evidence map›Paper›PMID 20885379›Full record

ArticleNature protocols2010

Fluorescent labeling of tetracysteine-tagged proteins in intact cells.

Carsten Hoffmann, Guido Gaietta, Alexander Zürn, Stephen R Adams, Sonia Terrillon, Mark H Ellisman, Roger Y Tsien, Martin J Lohse

Open access · greenAbstract read
In one paragraph

Article in Nature protocols, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 87 papers.

0numbers the graph read from it
0cells of the map it votes in
87citing papers in PubMed
5.7field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

87 citing papers in PubMed, 213 citations in OpenAlex.

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27 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Carsten HoffmannDepartment of Pharmacology and Toxicology, University of Würzburg, Germany.
Guido Gaietta
Alexander Zürn
Stephen R Adams
Sonia Terrillon
Mark H Ellisman
Roger Y Tsien
Martin J Lohse
University of California, San Diego · USUniversity of Würzburg · DE

Funding

VOLUMETRIC CONTOUR-BASED SURFACE RECONSTRUCTIONP41RR004050 · NCRR · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI AKASSOGLOU, KATERINA · 1989 to 2011
$28.0M
Howard Hughes Medical InstituteNCRR NIH HHS P41 RR004050
6 · The paper itself

Abstract

In this paper, we provide a general protocol for labeling proteins with the membrane-permeant fluorogenic biarsenical dye fluorescein arsenical hairpin binder-ethanedithiol (FlAsH-EDT₂). Generation of the tetracysteine-tagged protein construct by itself is not described, as this is a protein-specific process. This method allows site-selective labeling of proteins in living cells and has been applied to a wide variety of proteins and biological problems. We provide here a generally applicable labeling procedure and discuss the problems that can occur as well as general considerations that must be taken into account when designing and implementing the procedure. The method can even be applied to proteins with expression below 1 pmol mg⁻¹ of protein, such as G protein-coupled receptors, and it can be used to study the intracellular localization of proteins as well as functional interactions in fluorescence resonance energy transfer experiments. The labeling procedure using FlAsH-EDT₂ as described takes 2-3 h, depending on the number of samples to be processed.

Indexed as

Amino Acid SequenceAnimalsArsenicalsBinding SitesCells, CulturedFluoresceinsFluorescence Resonance Energy TransferFluorescent DyesHumansOrganometallic CompoundsProtein BindingProteinsStaining and Labeling4',5'-bis(1,3,2-dithioarsolan-2-yl)fluoresceinArsenicalsFluoresceinsFluorescent DyesOrganometallic CompoundsProteins

Identifiers

PMID20885379
PMCPMC3086663
OpenAlexW2035460066

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.