Evidence map›Paper›PMID 20882353›Full record

ArticleJournal of inherited metabolic disease2010

Mutations in the promoter region of the aldolase B gene that cause hereditary fructose intolerance.

Erin M Coffee, Dean R Tolan

Open access · greenAbstract read
In one paragraph

Article in Journal of inherited metabolic disease, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 43 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Erin M CoffeeMolecular Biology, Cell Biology, and Biochemistry Program, Boston, MA 02215, USA. erin@bu.edu
Dean R Tolan
Boston University · US

Funding

Metabolic Pathways and Defects in Fructose MetabolismR01DK065089 · NIDDK · BOSTON UNIVERSITY (CHARLES RIVER CAMPUS) · PI TOLAN, DEAN R. · 2004 to 2009
$1.5M
NIDDK NIH HHS DK-065089NIDDK NIH HHS R01 DK065089
6 · The paper itself

Abstract

Hereditary fructose intolerance (HFI) is a potentially fatal inherited metabolic disease caused by a deficiency of aldolase B activity in the liver and kidney. Over 40 disease-causing mutations are known in the protein-coding region of ALDOB. Mutations upstream of the protein-coding portion of ALDOB are reported here for the first time. DNA sequence analysis of 61 HFI patients revealed single base mutations in the promoter, intronic enhancer, and the first exon, which is entirely untranslated. One mutation, g.-132G>A, is located within the promoter at an evolutionarily conserved nucleotide within a transcription factor-binding site. A second mutation, IVS1+1G>C, is at the donor splice site of the first exon. In vitro electrophoretic mobility shift assays show a decrease in nuclear extract-protein binding at the g.-132G>A mutant site. The promoter mutation results in decreased transcription using luciferase reporter plasmids. Analysis of cDNA from cells transfected with plasmids harboring the IVS1+1G>C mutation results in aberrant splicing leading to complete retention of the first intron (~5 kb). The IVS1+1G>C splicing mutation results in loss of luciferase activity from a reporter plasmid. These novel mutations in ALDOB represent 2% of alleles in American HFI patients, with IVS1+1G>C representing a significantly higher allele frequency (6%) among HFI patients of Hispanic and African-American ethnicity.

Indexed as

Mutation, MissenseBlack or African AmericanCells, CulturedChild, PreschoolDNA Mutational AnalysisFemaleFructose-Bisphosphate AldolaseFructose IntoleranceGenetic TestingHispanic or LatinoHumansInfantMalePromoter Regions, GeneticTransfectionFructose-Bisphosphate Aldolase

Identifiers

PMID20882353
PMCPMC2993836
OpenAlexW2001121741

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.