Evidence map›Paper›PMID 20882058›Full record

ArticleThe ISME journal2011

Patterns of fungal diversity and composition along a salinity gradient.

Devon J Mohamed, Jennifer B H Martiny

Abstract read
In one paragraph

Article in The ISME journal, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 54 papers.

0numbers the graph read from it
0cells of the map it votes in
54citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

54 citing papers in PubMed.

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  13. Appendage-BearingJournal of fungi (Basel, Switzerland) · 2023
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4 · The record

Corrections and comments

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5 · Who and what money

Authors and funding

2 authors.

Devon J MohamedDepartment of Ecology and Evolutionary Biology, Brown University, Providence, RI, USA.
Jennifer B H Martiny

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Estuarine salinity gradients are known to influence plant, bacterial and archaeal community structure. We sequenced 18S rRNA genes to investigate patterns in sediment fungal diversity (richness and evenness of taxa) and composition (taxonomic and phylogenetic) along an estuarine salinity gradient. We sampled three marshes--a salt, brackish and freshwater marsh--in Rhode Island. To compare the relative effect of the salinity gradient with that of plants, we sampled fungi in plots with Spartina patens and in plots from which plants were removed 2 years prior to sampling. The fungal sediment community was unique compared with previously sampled fungal communities; we detected more Ascomycota (78%), fewer Basidiomycota (6%) and more fungi from basal lineages (16%) (Chytridiomycota, Glomeromycota and four additional groups) than typically found in soil. Across marshes, fungal composition changed substantially, whereas fungal diversity differed only at the finest level of genetic resolution, and was highest in the intermediate, brackish marsh. In contrast, the presence of plants had a highly significant effect on fungal diversity at all levels of genetic resolution, but less of an effect on fungal composition. These results suggest that salinity (or other covarying parameters) selects for a distinctive fungal composition, and plants provide additional niches upon which taxa within these communities can specialize and coexist. Given the number of sequences from basal fungal lineages, the study also suggests that further sampling of estuarine sediments may help in understanding early fungal evolution.

Indexed as

BiodiversitySalinityWetlandsAscomycotaBasidiomycotaFungiGeologic SedimentsMolecular Sequence DataPhylogenyPoaceaeRhode IslandRNA, Ribosomal, 18SRNA, Ribosomal, 18S

Identifiers

PMID20882058
PMCPMC3105720

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.