Evidence map›Paper›PMID 20881472›Full record

ArticleAIDS (London, England)2010

Fine-tuning of T-cell receptor avidity to increase HIV epitope variant recognition by cytotoxic T lymphocytes.

Michael S Bennett, Aviva Joseph, Hwee L Ng, Harris Goldstein, Otto O Yang

Abstract read
In one paragraph

Article in AIDS (London, England), 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 34 citations in OpenAlex.

  1. Article
  2. Article
  3. Therapeutic Vaccines for the Treatment of HIV.Translational research : the journal of laboratory and clinical medicine · 2020
    Review
  4. Chimeric Antigen Receptors Targeting Human Cytomegalovirus.The Journal of infectious diseases · 2020
    Article
  5. Article
  6. Lentiviral Vector-Based Dendritic Cell Vaccine Suppresses HIV Replication in Humanized Mice.Molecular therapy : the journal of the American Society of Gene Therapy · 2019
    Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 4 institutions in 2 countries.

Michael S BennettDepartment of Microbiology, Immunology, and Molecular Genetics, University of California, Los Angeles, USA.
Aviva Joseph
Hwee L Ng
Harris Goldstein
Otto O Yang
Pediatrics and Genetics · USAlbert Einstein College of Medicine · USLaboratory of Molecular Genetics · PLUniversity of California, Los Angeles · US

Funding

Immunology/Pathology CoreP30AI051519 · NIAID · YESHIVA UNIVERSITY · PI GOLDSTEIN, HARRIS · 2003 to 2013
$18.6M
HIV-1 Excape from Inhibiton by Cytotoxic T LymphocytesR01AI043203 · NIAID · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI YANG, OTTO O · 1998 to 2012
$4.6M
Mechanisms of in vivo protection from HIV infectionR01AI067136 · NIAID · ALBERT EINSTEIN COLLEGE OF MEDICINE · PI GOLDSTEIN, HARRIS · 2007 to 2010
$1.6M
NIAID NIH HHS AI043203NIAID NIH HHS AI051519NIAID NIH HHS AI067136NIAID NIH HHS P30 AI051519NIAID NIH HHS R01 AI043203NIAID NIH HHS R01 AI067136
6 · The paper itself

Abstract

objectiveT-cell receptor (TCR) gene therapy is an approach being considered for HIV-1, but epitope mutation is a significant barrier. We assessed whether HIV-specific TCR can be modified to have broader coverage of epitope variants by recombining polymorphisms between public clonotype TCR sequences.

designPublic clonotype TCRs recognizing the same epitope often differ by polymorphisms in their third complementarity determining regions (CDR3). We assessed whether novel combinations of such polymorphisms could improve TCR recognition of epitope variation.

methodsA TCR recognizing the HLA A*0201-restricted epitope SLYNTVATL (Gag 77-85, SL9) was engineered to have combinations of four polymorphisms in the CDR3 regions compared to another SL9-specific TCR. These novel TCRs were screened for functional avidities against SL9 epitope variants and abilities to mediate cytotoxic T-lymphocyte suppression of HIV-1 containing the same epitope variants.

resultsThe TCRs varied modestly in functional avidities for SL9 variants, due to alterations in affinity. This translated to differences in antiviral activities against HIV-1 when functional avidity changes crossed the previously defined threshold required for efficient recognition of HIV-1-infected cells. Higher avidity TCR mutants had generally broader recognition of SL9 variants.

conclusionThese results indicate that rationally targeted increases in functional avidities can be utilized to maximize the antiviral breadth of transgenic TCRs. In contrast to previously reported random mutagenesis to markedly increase functional avidities, tuning through recombining naturally occurring polymorphisms may offer a more physiologic approach that minimizes the risk of deleterious TCR reactivities.

Indexed as

Cell DifferentiationCytotoxicity Tests, ImmunologicEpitopes, T-Lymphocytegag Gene Products, Human Immunodeficiency VirusHIV-1HIV AntigensHumansMutationReceptors, Antigen, T-CellT-Lymphocytes, CytotoxicViral ProteinsEpitopes, T-Lymphocytegag Gene Products, Human Immunodeficiency VirusHIV AntigensReceptors, Antigen, T-CellViral Proteins

Identifiers

PMID20881472
PMCPMC2997528
OpenAlexW1982947765

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.