Evidence map›Paper›PMID 20880495›Full record

ArticleDevelopmental biology2011

APOBEC2, a selective inhibitor of TGFβ signaling, regulates left-right axis specification during early embryogenesis.

Alin Vonica, Alessandro Rosa, Brigitte L Arduini, Ali H Brivanlou

Open access · greenAbstract read
In one paragraph

Article in Developmental biology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed, 1 pooled it
1.4field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 1 synthesis or guideline pooled it, 46 citations in OpenAlex.

  1. Pooled it
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  8. Review
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  12. Aberrant transcriptomes and DNA methylomes define pathways that drive pathogenesis and loss of brain laterality/asymmetry in schizophrenia and bipolar disorder.American journal of medical genetics. Part B, Neuropsychiatric genetics : the official publication of the International Society of Psychiatric Genetics · 2019
    Article
  13. Review
  14. Apobec2 deficiency causes mitochondrial defects and mitophagy in skeletal muscle.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2018
    Article
  15. Article
  16. Article
  17. RNA Editing-Systemic Relevance and Clue to Disease Mechanisms?Frontiers in molecular neuroscience · 2016
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Alin VonicaLaboratory of Vertebrate Embryology, The Rockefeller University, 1230 York Ave., New York, NY 10065, USA. av2443@columbia.edu
Alessandro Rosa
Brigitte L Arduini
Ali H Brivanlou
Rockefeller University · US

Funding

MOLECULAR BASIS OF NEURAL DEVELOPMENT IN XENOPUSR01HD032105 · NICHD · ROCKEFELLER UNIVERSITY · PI BRIVANLOU, ALI H · 1996 to 2010
$2.9M
Targets of a cytidine deaminase required for left-right axis in XenopusR03HD057334 · NICHD · ROCKEFELLER UNIVERSITY · PI VONICA, ALIN · 2009 to 2010
$168k
NICHD NIH HHS R01 HD032105NICHD NIH HHS R03 HD057334
6 · The paper itself

Abstract

The specification of left-right asymmetry is an evolutionarily conserved developmental process in vertebrates. The interplay between two TGFβ ligands, Derrière/GDF1 and Xnr1/Nodal, together with inhibitors such as Lefty and Coco/Cerl2, have been shown to provide the signals that lead to the establishment of laterality. However, molecular events leading to and following these signals remain mostly unknown. We find that APOBEC2, a member of the cytidine deaminase family of DNA/RNA editing enzymes, is induced by TGFβ signaling, and that its activity is necessary to specify the left-right axis in Xenopus and zebrafish embryos. Surprisingly, we find that APOBEC2 selectively inhibits Derrière, but not Xnr1, signaling. The inhibitory effect is conserved, as APOBEC2 blocks TGFβ signaling, and promotes muscle differentiation, in a mammalian myoblastic cell line. This demonstrates for the first time that a putative RNA/DNA editing enzyme regulates TGFβ signaling and plays a major role in development.

Indexed as

Body PatterningEmbryonic DevelopmentRNA EditingAnimalsCytidine DeaminaseDNAIntercellular Signaling Peptides and ProteinsSignal TransductionTransforming Growth Factor betaXenopus laevisXenopus ProteinsZebrafishCytidine DeaminaseDNAGDF3 protein, XenopusIntercellular Signaling Peptides and Proteinsnodal1 protein, XenopusTransforming Growth Factor betaXenopus Proteins

Identifiers

PMID20880495
PMCPMC3038383
OpenAlexW2063190524

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.