Evidence map›Paper›PMID 20876716›Full record

ArticleDiabetes2011

Both polymorphic variable number of tandem repeats and autoimmune regulator modulate differential expression of insulin in human thymic epithelial cells.

Chuan Qi Cai, Tao Zhang, Mary B Breslin, Matthieu Giraud, Michael S Lan

Open access · hybridAbstract read
In one paragraph

Article in Diabetes, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
1.7field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 34 citations in OpenAlex.

  1. Article
  2. Systematic and proactive evaluation of AIRE missense variant effects.bioRxiv : the preprint server for biology · 2025
    Article
  3. Article
  4. Review
  5. Article
  6. Review
  7. The Concept of Immunogenetics.Advances in experimental medicine and biology · 2022
    Article
  8. Review
  9. Review
  10. Twenty Years of AIRE.Frontiers in immunology · 2018
    Review
  11. Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Aire and T cell development.Current opinion in immunology · 2011
    Review
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Chuan Qi CaiThe Research Institute for Children, Children’s Hospital, New Orleans, Louisiana, USA.
Tao Zhang
Mary B Breslin
Matthieu Giraud
Michael S Lan
Louisiana State University Health Sciences Center New Orleans · USChildren's Hospital of New Orleans · USHarvard University · US

Funding

Transcription Factors in Neuroendocrine DifferentiationR01DK061436 · NIDDK · LOUISIANA STATE UNIV HSC NEW ORLEANS · PI LAN, MICHAEL S · 2003 to 2009
$1.5M
NIDDK NIH HHS DK-061436NIDDK NIH HHS R01 DK061436
6 · The paper itself

Abstract

objectivePolymorphic INS-VNTR plays an important role in regulating insulin transcript expression in the human thymus that leads to either insulin autoimmunity or tolerance. The molecular mechanisms underlying the INS-VNTR haplotype-dependent insulin expression are still unclear. In this study, we determined the mechanistic components underlying the differential insulin gene expression in human thymic epithelial cells, which should have profound effects on the insulin autoimmune tolerance induction. RESEARCH DESIGN AND

methodsA repetitive DNA region designated as a variable number of tandem repeats (VNTR) is located upstream of the human insulin gene and correlates with the incidence of type 1 diabetes. We generated six class I and two class III VNTR constructs linked to the human insulin basal promoter or SV40 heterologous promoter/enhancer and demonstrated that AIRE protein modulates the insulin promoter activities differentially through binding to the VNTR region.

resultsHere we show that in the presence of the autoimmune regulator (AIRE), the class III VNTR haplotype is responsible for an average of three-fold higher insulin expression than class I VNTR in thymic epithelial cells. In a protein-DNA pull-down experiment, AIRE protein is capable of binding to VNTR class I and III probes. Further, the transcriptional activation of the INS-VNTR by AIRE requires the insulin basal promoter. The VNTR sequence loses its activation activity when linked to a heterologous promoter and/or enhancer.

conclusionsThese findings demonstrate a type 1 diabetes predisposition encoded by the INS-VNTR locus and a critical function played by AIRE, which constitute a dual control mechanisms regulating quantitative expression of insulin in human thymic epithelial cells.

Indexed as

Polymorphism, GeneticAutoimmunityCloning, MolecularDiabetes Mellitus, Type 1DNA PrimersEnhancer Elements, GeneticEpithelial CellsExonsGene Expression RegulationGenes, ReporterHumansInsulinLuciferasesMinisatellite RepeatsPolymerase Chain ReactionPromoter Regions, GeneticDNA PrimersInsulinLuciferases

Identifiers

PMID20876716
PMCPMC3012191
OpenAlexW2155964470

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.