Evidence map›Paper›PMID 20876472›Full record

ArticleNeurology2010

A comprehensive analysis of deletions, multiplications, and copy number variations in PARK2.

D M Kay, C F Stevens, T H Hamza, J S Montimurro, C P Zabetian, S A Factor, A Samii, A Griffith, J W Roberts, E S Molho and 9 more

Open access · bronzeAbstract read
In one paragraph

Article in Neurology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 44 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
44citing papers in PubMed, 3 pooled it
3.8field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

44 citing papers in PubMed, 3 syntheses or guidelines pooled it, 86 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Pooled it
  4. Article
  5. Article
  6. Genome-wide association study of copy number variations in Parkinson's disease.medRxiv : the preprint server for health sciences · 2025
    Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. Article
  13. Long-Read Sequencing Resolves a Complex Structural Variant in PRKN Parkinson's Disease.Movement disorders : official journal of the Movement Disorder Society · 2023
    Article
  14. Genes · 2023
    Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Frequency of Heterozygous Parkin (Frontiers in neurology · 2021
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 1 institution in 1 country.

D M KayWadsworth Center, New York State Department of Health, Albany, NY 12201-2002, USA.
C F Stevens
T H Hamza
J S Montimurro
C P Zabetian
S A Factor
A Samii
A Griffith
J W Roberts
E S Molho
D S Higgins
S Gancher
L Moses
S Zareparsi
P Poorkaj
T Bird
J Nutt
G D Schellenberg
H Payami
Emory University · US

Funding

OREGON CLINICAL AND TRANSLATIONAL SCIENCE INSTITUTEUL1RR024140 · NCRR · OREGON HEALTH & SCIENCE UNIVERSITY · PI ORWOLL, ERIC S. · 2006 to 2011
$61.1M
Alzheimer's Disease Genetics ConsortiumU01AG032984 · NIA · UNIVERSITY OF PENNSYLVANIA · PI SCHELLENBERG, GERARD DAVID · 2009 to 2024
$60.4M
Outreach, Recruitment and Education CoreP30AG008017 · NIA · OREGON HEALTH & SCIENCE UNIVERSITY · PI BOISE, LINDA · 1990 to 2019
$27.7M
Udall Center Director's meeting poster awardP50NS062684 · NINDS · UNIVERSITY OF WASHINGTON · PI MONTINE, THOMAS J · 2009 to 2020
$18.3M
Effects of Coenzyme Q10 in Parkinson Disease-Phase 3U01NS050324 · NINDS · WEILL MEDICAL COLL OF CORNELL UNIV · PI BEAL, M FLINT · 2005 to 2010
$9.3M
Genome Wide associate analysis of Alzheimer's DiseaseRC2AG036528 · NIA · UNIVERSITY OF PENNSYLVANIA · PI SCHELLENBERG, GERARD DAVID · 2009 to 2010
$5.4M
GENETIC ANALYSIS OF ONSET AGE OF PARKINSONS DISEASER01NS036960 · NINDS · WADSWORTH CENTER · PI PAYAMI, HAYDEH · 1998 to 2012
$3.9M
Biomarkers for Preclinical Parkinson's diseaseR01NS057567 · NINDS · UNIVERSITY OF WASHINGTON · PI ZHANG, JING · 2008 to 2012
$3.1M
Using Multiplex Families to map Genes that Modify Susceptibility and Age at OnsetR01NS065070 · NINDS · UNIVERSITY OF WASHINGTON · PI ZABETIAN, CYRUS P · 2009 to 2012
$2.0M
LEVODOPA PHARMACOKINETICS &PHARMACODYNAMICSR01NS021062 · NINDS · OREGON HEALTH & SCIENCE UNIVERSITY · PI NUTT, JOHN G · 1985 to 2008
$1.8M
Cloning of Late-onset Alzheimer's Disease GenesR01AG021544 · NIA · UNIVERSITY OF WASHINGTON · PI SCHELLENBERG, GERARD DAVID · 2002 to 2007
$1.6M
Post-translational Modifications of Proteins in Parkinson?s diseaseR01AG033398 · NIA · UNIVERSITY OF WASHINGTON · PI ZHANG, JING · 2008 to 2012
$1.6M
NCRR NIH HHS UL1-RR024140NIA NIH HHS 5K01AG024329-02NIA NIH HHS AG 08017NIA NIH HHS R01 AG033398-01NIA NIH HHS R01 AG 11762NIA NIH HHS R01 AG 21544NIA NIH HHS RC2AG036528NIA NIH HHS U01AG032984NIMH NIH HHS R01 MH089004NINDS NIH HHS 1 U01 NS50324-01A1NINDS NIH HHS NS R01-36960NINDS NIH HHS P50 NS062684-01NINDS NIH HHS R01 NS036960-09NINDS NIH HHS R01 NS057567-01NINDS NIH HHS R01 NS065070NINDS NIH HHS R01 NS065070-01NINDS NIH HHS R01 NS 21062
6 · The paper itself

Abstract

objectivesTo perform a comprehensive population genetic study of PARK2. PARK2 mutations are associated with juvenile parkinsonism, Alzheimer disease, cancer, leprosy, and diabetes mellitus, yet ironically, there has been no comprehensive study of PARK2 in control subjects; and to resolve controversial association of PARK2 heterozygous mutations with Parkinson disease (PD) in a well-powered study.

methodsWe studied 1,686 control subjects (mean age 66.1 ± 13.1 years) and 2,091 patients with PD (mean onset age 58.3 ± 12.1 years). We tested for PARK2 deletions/multiplications/copy number variations (CNV) using semiquantitative PCR and multiplex ligation-dependent probe amplification, and validated the mutations by real-time quantitative PCR. Subjects were tested for point mutations previously. Association with PD was tested as PARK2 main effect, and in combination with known PD risk factors: SNCA, MAPT, APOE, smoking, and coffee intake.

resultsA total of 0.95% of control subjects and 0.86% of patients carried a heterozygous CNV mutation. CNV mutations found in 16 control subjects were all in exons 1-4, sparing exons that encode functionally critical protein domains. Thirteen patients had 2 CNV mutations, 5 had 1 CNV and 1 point mutation, and 18 had 1 CNV mutation. Mutations found in patients spanned exons 2-9. In whites, having 1 CNV was not associated with increased risk (odds ratio 1.05, p = 0.89) or earlier onset of PD (64.7 ± 8.6 heterozygous vs 58.5 ± 11.8 normal).

conclusionsThis comprehensive population genetic study in control subjects fills the void for a PARK2 reference dataset. There is no compelling evidence for association of heterozygous PARK2 mutations, by themselves or in combination with known risk factors, with PD.

Indexed as

Genetic Predisposition to DiseaseAdultAgedAged, 80 and overAge FactorsAge of OnsetDNA Copy Number VariationsFemaleGene FrequencyGenetic TestingHumansMaleMiddle AgedParkinson DiseaseReference ValuesSequence Deletionparkin proteinUbiquitin-Protein Ligases

Identifiers

PMID20876472
PMCPMC3013490
OpenAlexW2079985938

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.