Evidence map›Paper›PMID 20876108›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2010

Multiple lateral gene transfers and duplications have promoted plant parasitism ability in nematodes.

Etienne G J Danchin, Marie-Noëlle Rosso, Paulo Vieira, Janice de Almeida-Engler, Pedro M Coutinho, Bernard Henrissat, Pierre Abad

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 151 papers.

0numbers the graph read from it
0cells of the map it votes in
151citing papers in PubMed
33.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

151 citing papers in PubMed, 326 citations in OpenAlex.

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  9. Journal of agricultural and food chemistry · 2025
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91 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Etienne G J DanchinInstitut National de la Recherche Agronomique, Université de Nice-Sophia Antipolis, Centre National de la Recherche Scientifique, Unité Mixte de Recherche 1301, Intéractions Biotiques et Santé Végétale, F-06903 Sophia-Antipolis, France. etienne.danchin@sophia.inra.fr
Marie-Noëlle Rosso
Paulo Vieira
Janice de Almeida-Engler
Pedro M Coutinho
Bernard Henrissat
Pierre Abad
Université Côte d'Azur · FRArchitecture et Fonction des Macromolécules Biologiques · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Lateral gene transfer from prokaryotes to animals is poorly understood, and the scarce documented examples generally concern genes of uncharacterized role in the receiver organism. In contrast, in plant-parasitic nematodes, several genes, usually not found in animals and similar to bacterial homologs, play essential roles for successful parasitism. Many of these encode plant cell wall-degrading enzymes that constitute an unprecedented arsenal in animals in terms of both abundance and diversity. Here we report that independent lateral gene transfers from different bacteria, followed by gene duplications and early gain of introns, have shaped this repertoire. We also show protein immunolocalization data that suggest additional roles for some of these cell wall-degrading enzymes in the late stages of these parasites' life cycle. Multiple functional acquisitions of exogenous genes that provide selective advantage were probably crucial for the emergence and proficiency of plant parasitism in nematodes.

Indexed as

Biological EvolutionGene DuplicationPhylogenyAnimalsBase CompositionBayes TheoremCodonComputational BiologyGene Transfer, HorizontalGlycoside HydrolasesModels, GeneticNematodaPlantsPolygalacturonasePolysaccharide-LyasesRalstonia solanacearumCodonGlycoside Hydrolasespectate lyasePolygalacturonasePolysaccharide-Lyases

Identifiers

PMID20876108
PMCPMC2955110
OpenAlexW2002751165

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.