Evidence map›Paper›PMID 20875970›Full record

ArticleIEEE transactions on medical imaging2011

Using a visual discrimination model for the detection of compression artifacts in virtual pathology images.

Jeffrey P Johnson, Elizabeth A Krupinski, Michelle Yan, Hans Roehrig, Anna R Graham, Ronald S Weinstein

Abstract read
In one paragraph

Article in IEEE transactions on medical imaging, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Article
  2. Article
  3. Video compression to support the expansion of whole-slide imaging into cytology.Journal of medical imaging (Bellingham, Wash.) · 2019
    Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. The history of pathology informatics: A global perspective.Journal of pathology informatics · 2013
    Article
  9. Article
  10. Article
  11. Article
  12. Assessment of Boundary Discrimination Performance in a Printed Phantom.Proceedings of SPIE--the International Society for Optical Engineering
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Jeffrey P JohnsonSiemens Corporate Research, Princeton, NJ 08540, USA. johnson.jeffrey@siemens.com
Elizabeth A Krupinski
Michelle Yan
Hans Roehrig
Anna R Graham
Ronald S Weinstein

Funding

Optimized Compression for Telepathology Virtual SlidesR01EB008055 · NIBIB · UNIVERSITY OF ARIZONA · PI KRUPINSKI, ELIZABETH A · 2007 to 2009
$1.2M
NIBIB NIH HHS R01 EB008055
6 · The paper itself

Abstract

A major issue in telepathology is the extremely large and growing size of digitized "virtual" slides, which can require several gigabytes of storage and cause significant delays in data transmission for remote image interpretation and interactive visualization by pathologists. Compression can reduce this massive amount of virtual slide data, but reversible (lossless) methods limit data reduction to less than 50%, while lossy compression can degrade image quality and diagnostic accuracy. "Visually lossless" compression offers the potential for using higher compression levels without noticeable artifacts, but requires a rate-control strategy that adapts to image content and loss visibility. We investigated the utility of a visual discrimination model (VDM) and other distortion metrics for predicting JPEG 2000 bit rates corresponding to visually lossless compression of virtual slides for breast biopsy specimens. Threshold bit rates were determined experimentally with human observers for a variety of tissue regions cropped from virtual slides. For test images compressed to their visually lossless thresholds, just-noticeable difference (JND) metrics computed by the VDM were nearly constant at the 95th percentile level or higher, and were significantly less variable than peak signal-to-noise ratio (PSNR) and structural similarity (SSIM) metrics. Our results suggest that VDM metrics could be used to guide the compression of virtual slides to achieve visually lossless compression while providing 5-12 times the data reduction of reversible methods.

Indexed as

Models, TheoreticalAlgorithmsArtifactsBayes TheoremBreastBreast NeoplasmsCellular StructuresFemaleHistocytochemistryHumansImage Processing, Computer-AssistedLeast-Squares AnalysisMicroscopyTelepathology

Identifiers

PMID20875970
PMCPMC3881239

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.