Evidence map›Paper›PMID 20872835›Full record

ArticleInflammatory bowel diseases2011

Colitis locus on chromosome 2 impacting the severity of early-onset disease in mice deficient in GPX1 and GPX2.

R Steven Esworthy, Byung-Wook Kim, Garrett P Larson, M L Richard Yip, David D Smith, Min Li, Fong-Fong Chu

Open access · bronzeAbstract read
In one paragraph

Article in Inflammatory bowel diseases, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.7field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 33 citations in OpenAlex.

  1. Article
  2. Review
  3. The beginning of GPX2 and 30 years later.Free radical biology & medicine · 2022
    Review
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. New Insights into the Role of Trace Elements in IBD.BioMed research international · 2018
    Review
  10. Article
  11. Colitis-associated colon cancer: Is it in your genes?World journal of gastroenterology · 2015
    Review
  12. Selenium and inflammatory bowel disease.American journal of physiology. Gastrointestinal and liver physiology · 2015
    Review
  13. The Collaborative Cross as a resource for modeling human disease: CC011/Unc, a new mouse model for spontaneous colitis.Mammalian genome : official journal of the International Mammalian Genome Society · 2014
    Article
  14. Article
  15. Article
  16. Article
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

R Steven EsworthyDepartment of Cancer Biology, Beckman Research Institute of City of Hope, Duarte, California, USA.
Byung-Wook Kim
Garrett P Larson
M L Richard Yip
David D Smith
Min Li
Fong-Fong Chu
Beckman Research InstituteCity of Hope · US

Funding

Transgenic Mouse FacilityP30CA033572 · NCI · CITY OF HOPE/BECKMAN RESEARCH INSTITUTE · PI XIWEI WU · 1985 to 2026
$86.3M
The role of glutathione peroxidase in the pathogenesis of intestinal cancerR01CA114569 · NCI · BECKMAN RESEARCH INSTITUTE/CITY OF HOPE · PI CHU, FONG-FONG · 2006 to 2010
$1.4M
NCI NIH HHS P30 CA033572NCI NIH HHS P30 CA33572NCI NIH HHS R01 CA114569NCI NIH HHS R01CA114569
6 · The paper itself

Abstract

backgroundGenetic background has a profound effect on inflammatory bowel disease. The Gpx1 and Gpx2 double knockout (GPX1/2-DKO) mice on a mixed C57BL/6 (B6) and 129S1/SvimJ (129) background exhibit spontaneous ileocolitis. The DKO mice on a B6 background have mild ileocolitis. We characterized the 129 DKO mice to identify a genetic locus affecting disease severity.

methodsWe backcrossed B6;129 DKO mice to 129 and analyzed for ileocolitis penetrance and severity at N5, N7, and N10. By correlating disease severity with single-nucleotide polymorphism (SNP) markers, we identified a colitis locus.

resultsAs early as 9 days of age, 129 DKO N5 and N10 mice showed disease signs and morbidity. The N10 DKO mice had the severest colitis with nearly complete penetrance and high morbidity compared with other generations or backgrounds. 129 DKO mice had elevated colonic KC and SAA3 expression, shorter colon length, and cecal E. coli overgrowth compared to B6 DKO mice. Analysis of the B6 loci in 129 N5, N7, and N10 cohorts pointed to a region of chromosome 2: 119 Mbp contributing to mild symptoms.

conclusionsGPX1/2-DKO mice on 129 genetic background have the most aggressive colitis compared to B6;129 and B6 colonies. A B6 locus significantly contributing the resistance resides on chromosome 2: 119 Mbp. This region coincides with cytokine-deficiency-induced colitis susceptibility, Cdcs3, identified in the resistant B6 and sensitive C3H/HeJBir (C3Bir) with IL-10 deficiency. A three-way SNP analysis between 129, B6, and C3Bir locus points the major candidate genes to B2m, Dnajc17, Duox2, Pla2g4b, Pla2g4e, Pla2g4f and Slc30a4.

Indexed as

AnimalsApoptosisChromosomes, MammalianColonCrohn DiseaseGenetic LociGlutathione PeroxidaseGlutathione Peroxidase GPX1IleumInterleukin-6MiceMice, Inbred C57BLMice, KnockoutPolymerase Chain ReactionPolymorphism, Single NucleotideGlutathione PeroxidaseGlutathione Peroxidase GPX1Gpx1 protein, mouseGpx2 protein, mouseInterleukin-6

Identifiers

PMID20872835
PMCPMC3526817
OpenAlexW1998798429

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.