Evidence map›Paper›PMID 20872219›Full record

ArticleCurrent microbiology2011

Construction and characterization of Escherichia coli whole-cell biosensors for toluene and related compounds.

F Behzadian, H Barjeste, S Hosseinkhani, A R Zarei

Abstract readEvaluation Study
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In one paragraph

Article in Current microbiology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Review
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  5. Review
  6. Article
  7. Synthetic biology expands chemical control of microorganisms.Current opinion in chemical biology · 2015
    Review
  8. Article
  9. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

F BehzadianDepartment of Molecular Genetics, Research Center for Sciences and Biotechnology, Lavizan, Tehran, 15875-1774, Iran. fbehzadian@yahoo.com
H Barjeste
S Hosseinkhani
A R Zarei

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The XylR regulatory protein is a transcriptional activator from the TOL plasmid of Pseudomonas putida mt-2 that is involved in the toluene and benzene degradation pathway. Here we describe the construction and laboratory characterization of recombinant biosensors (pGLPX plasmids) based on XylR and its cognate promoter (Pu). In the pGLPX plasmid, the reporter luc gene is under the control of the Pu promoter. We evaluated the ability of two distinct nucleotide sequences to function as SD elements and improve sensitivity of bioreporting. We also evaluated the effect of introducing the T₂rrnβ terminator on the specificity of the construct. E. coli transformed with pGLPX plasmids were used to sense toluene and its derivatives. The pattern of induction was different for each derivative. In general, more luciferase activity was induced by toluene and benzene than by TNT and DNT at most tested concentrations. The bioluminescence response of the reporter strains to the nitrotoluenes was significantly stronger at lower concentrations (≥ 50 μmol) than at higher concentrations. Our results show that the SD sequence (taaggagg) is crucially important for biosensor sensitivity. The presence of the T₂rrnβ terminator in the bioreporter plasmid prevents nonspecific responses and also reduces biosensor sensitivity upon exposure to inducers. These data suggest that pGLPX strains can be used as whole-cell biosensors to detect toluene and related compounds. Further investigation will be required to optimize the application of pGLPX biosensors.

Indexed as

Artificial Gene FusionBacterial ProteinsBenzeneBiosensing TechniquesDinitrobenzenesDNA-Binding ProteinsEscherichia coliGene ExpressionGenes, ReporterLuciferasesPlasmidsPromoter Regions, GeneticPseudomonas putidaSensitivity and SpecificityTolueneTranscription Factors2,6-dinitrotolueneBacterial ProteinsBenzeneDinitrobenzenesDNA-Binding ProteinsLuciferasesTolueneTranscription FactorsTrinitrotolueneXylR protein, Pseudomonas

Identifiers

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.