Evidence map›Paper›PMID 20869334›Full record

ArticleDNA repair2010

Over-expression of miR-100 is responsible for the low-expression of ATM in the human glioma cell line: M059J.

Wooi Loon Ng, Dan Yan, Xiangming Zhang, Yin-Yuan Mo, Ya Wang

Erratum issuedOpen access · greenAbstract read
In one paragraph

Article in DNA repair, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 61 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
61citing papers in PubMed, 1 pooled it
3.7field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

61 citing papers in PubMed, 1 synthesis or guideline pooled it, 127 citations in OpenAlex.

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1 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Wooi Loon NgDepartment of Radiation Oncology, Emory University School of Medicine, Winship Cancer Institute of Emory University, Atlanta, GA 30322, USA.
Dan Yan
Xiangming Zhang
Yin-Yuan Mo
Ya Wang
Emory University · USSouthern Illinois University School of Medicine · US

Funding

Atlanta Clinical and Translational Science Institute (ACTSI) RenewalUL1TR000454 · NCATS · EMORY UNIVERSITY · PI STEPHENS, DAVID S · 2012 to 2016
$25.8M
A new role of MEPE/OF45 as a co-factor of CHK1 for DNA damage responseR01GM080771 · NIGMS · THOMAS JEFFERSON UNIVERSITY · PI WANG, YA · 2007 to 2010
$1.4M
NCATS NIH HHS UL1 TR000454NIGMS NIH HHS GM80771NIGMS NIH HHS R01 GM080771
6 · The paper itself

Abstract

M059J and M059K cells were isolated from different portions of the same human malignant glioma. M059J cells are more radiosensitive than M059K cells due to the absence of DNA-PKcs and low-expression of ATM. The mechanism concerning the absence of DNA-PKcs in M059J is due to the frameshift mutation in PRKDC (DNA-PKcs gene); however, the reason for the low-expression of ATM in M059J cells remains unclear. We showed here that the main reason for the lower ATM level in M059J cells was not related to the transcriptional regulation or protein degradation but was related to post-transcriptional regulation. Based on database information, we found that the 3'-untranslational region (UTR) of ATM contains a miR-100 binding site. By using an RNase protection assay and qRT-PCR, we identified that miR-100 is highly-expressed in M059J cells. We further demonstrated that miR-100 bound to the 3'-UTR of ATM. Knocking down miR-100 promotes ATM expression in M059J cells. Up-regulating miR-100 in M059K cells and other cancer cells reduces ATM expression and sensitizes these cells to ionizing radiation. These results indicate that ATM is a target of miR-100, elucidating that the low-expression of ATM in M059J cells is mainly due to the high expression of miR-100. These results also suggest that miR-100 could be a useful tool to target ATM and sensitize tumor cells to ionizing radiation.

Indexed as

Gene Expression Regulation, NeoplasticAtaxia Telangiectasia Mutated ProteinsBase SequenceCell Cycle ProteinsCell DeathCell Line, TumorDNA-Binding ProteinsGliomaHumansMicroRNAsMolecular Sequence DataProtein BiosynthesisProtein Serine-Threonine KinasesTranscription, GeneticTumor Suppressor ProteinsAtaxia Telangiectasia Mutated ProteinsATM protein, humanCell Cycle ProteinsDNA-Binding ProteinsMicroRNAsMIRN100 microRNA, humanProtein Serine-Threonine KinasesTumor Suppressor Proteins

Identifiers

PMID20869334
PMCPMC2970684
OpenAlexW1972162902

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.