Evidence map›Paper›PMID 20868489›Full record

ArticleBMC biology2010

An arthropod cis-regulatory element functioning in sensory organ precursor development dates back to the Cambrian.

Savita Ayyar, Barbara Negre, Pat Simpson, Angelika Stollewerk

Open access · goldAbstract readComparative Study
In one paragraph

Article in BMC biology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.5field-weighted citation impact, top 42% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 27 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. A flexible genetic toolkit for arthropod neurogenesis.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2016
    Review
  6. Article
  7. Article
  8. The role of self-organization in developmental evolution.Theory in biosciences = Theorie in den Biowissenschaften · 2014
    Article
  9. Article
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Savita AyyarDepartment of Zoology, University of Cambridge, Downing Street, Cambridge CB2 3EJ, UK.
Barbara Negre
Pat Simpson
Angelika Stollewerk
University of Cambridge · GBQueen Mary University of London · GB

Funding

Biotechnology and Biological Sciences Research Council BB/F021909/1Wellcome Trust 29156
6 · The paper itself

Abstract

backgroundAn increasing number of publications demonstrate conservation of function of cis-regulatory elements without sequence similarity. In invertebrates such functional conservation has only been shown for closely related species. Here we demonstrate the existence of an ancient arthropod regulatory element that functions during the selection of neural precursors. The activity of genes of the achaete-scute (ac-sc) family endows cells with neural potential. An essential, conserved characteristic of proneural genes is their ability to restrict their own activity to single or a small number of progenitor cells from their initially broad domains of expression. This is achieved through a process called lateral inhibition. A regulatory element, the sensory organ precursor enhancer (SOPE), is required for this process. First identified in Drosophila, the SOPE contains discrete binding sites for four regulatory factors. The SOPE of the Drosophila asense gene is situated in the 5' UTR.

resultsThrough a manual comparison of consensus binding site sequences we have been able to identify a SOPE in UTR sequences of asense-like genes in species belonging to all four arthropod groups (Crustacea, Myriapoda, Chelicerata and Insecta). The SOPEs of the spider Cupiennius salei and the insect Tribolium castaneum are shown to be functional in transgenic Drosophila. This would place the origin of this regulatory sequence as far back as the last common ancestor of the Arthropoda, that is, in the Cambrian, 550 million years ago.

conclusionsThe SOPE is not detectable by inter-specific sequence comparison, raising the possibility that other ancient regulatory modules in invertebrates might have escaped detection.

Indexed as

Biological EvolutionAchaete-Scute Complex Genome RegionAmino Acid SequenceAnimalsArthropodsBase SequenceBasic Helix-Loop-Helix ProteinsBinding SitesConserved SequenceGene DuplicationGene Expression Regulation, DevelopmentalMolecular Sequence DataNervous SystemNeural PlatePhylogenyRegulatory Elements, TranscriptionalBasic Helix-Loop-Helix Proteins

Identifiers

PMID20868489
PMCPMC2958161
OpenAlexW2055332007

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.