Evidence map›Paper›PMID 20865301›Full record

ArticlePlant molecular biology2010

Molecular characterization and functional analysis of Glycine max sterol methyl transferase 2 genes involved in plant membrane sterol biosynthesis.

Anjanasree K Neelakandan, Hanh T M Nguyen, Rajesh Kumar, Lam-Son Phan Tran, Satish K Guttikonda, Truyen Ngoc Quach, Donovan L Aldrich, W David Nes, Henry T Nguyen

Abstract read
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In one paragraph

Article in Plant molecular biology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.9field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 30 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. The dehiscence process inJournal of ginseng research · 2022
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  7. Article
  8. Article
  9. Arabidopsis ribosomal proteins control vacuole trafficking and developmental programs through the regulation of lipid metabolism.Proceedings of the National Academy of Sciences of the United States of America · 2015
    Article
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 1 country.

Anjanasree K NeelakandanDivision of Plant Sciences and National Center for Soybean Biotechnology, University of Missouri, Columbia, MO 65211, USA.
Hanh T M Nguyen
Rajesh Kumar
Lam-Son Phan Tran
Satish K Guttikonda
Truyen Ngoc Quach
Donovan L Aldrich
W David Nes
Henry T Nguyen
University of Missouri · USTexas Tech University · USThe University of Texas at Dallas · USUniversity of Nebraska–Lincoln · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Sterol C24 methyltransferase (SMT2) genes governing the pattern of phytosterols synthesized in higher plants have been studied in Glycine seedlings and wild-type and engineered Arabidopsis thaliana plants. The SMT2 genes of soybean (SMT2-1 and SMT2-2) previously cloned and characterized (Neelakandan et al. 2009) were shown to complement the SMT deficient cvp1 mutant Arabidopsis plants, consistent with their role in regulation of 24-alkyl sterol-controlled plant physiology. Further analysis of these genes showed that environmental cues, including dehydration, cold, and abscisic acid induced differential changes in transcript levels of the SMT2 during soybean seedling growth. Sterol analyses of transgenic Arabidopsis seeds originating in variant constructs of AtHMGR1, GmSMT1, and GmSMT2 engineered in seeds showed relevant modifications in the ratio of 24-methyl to 24-ethyl sterol in the direction of sitosterol formation. To provide insight into the structural features of the sterol gene that affects transcript regulation, the upstream promoter sequences of soybean SMT2 genes were cloned and characterized. Sequence analysis revealed several important cis-elements and transcription factor binding sites. The analysis of promoter-GUS fusions in transgenic Arabidopsis plants revealed shared and distinct expression features in different developmental stages and tissues. The data are interpreted to imply that SMT2 is an important contributor to normal plant growth and development.

Indexed as

Abscisic AcidAmino Acid SequenceArabidopsisCloning, MolecularCold TemperatureGene Expression Regulation, PlantGlycine maxMethyltransferasesMolecular Sequence DataPhytosterolsPlant ProteinsPlants, Genetically ModifiedPromoter Regions, GeneticSeedsSequence AlignmentSequence Analysis, DNAAbscisic AcidMethyltransferasesPhytosterolsPlant ProteinsSodium ChlorideWater

Identifiers

PMID20865301
OpenAlexW2093190797

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.