Evidence map›Paper›PMID 20865292›Full record

ArticleFunctional & integrative genomics2011

Quantitative trait loci conferring resistance to Fusarium head blight in barley respond differentially to Fusarium graminearum infection.

Haiyan Jia, Benjamin P Millett, Seungho Cho, Hatice Bilgic, Wayne W Xu, Kevin P Smith, Gary J Muehlbauer

Abstract readComparative Study
PubMed Publisher
In one paragraph

Article in Functional & integrative genomics, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.2field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 12 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Haiyan JiaDepartment of Agronomy and Plant Genetics, University of Minnesota, St. Paul, MN 55108, USA.
Benjamin P Millett
Seungho Cho
Hatice Bilgic
Wayne W Xu
Kevin P Smith
Gary J Muehlbauer
University of Minnesota · USMonsanto (United States) · USResearch Triangle Park Foundation · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Fusarium head blight (FHB), primarily caused by Fusarium graminearum, reduces grain yield and quality in barley. Resistance to FHB is partial and quantitatively inherited. Previously, major FHB resistant QTL were detected on barley chromosome 2H Bin 8 and 2H Bin 10, and another QTL for reduced deoxynivalenol (DON) accumulation was identified on chromosome 3H Bin 6. To develop an understanding of the molecular responses controlled by these loci, we examined DON and fungal biomass levels and the transcriptome differences in near-isogenic line (NIL) pairs carrying contrasting resistant and susceptible alleles at these QTL during F. graminearum infection. No overlap was found among the differentially accumulated transcripts of the three NIL pairs, indicating that the response to infection controlled by the resistance alleles at each QTL may be distinct. Transcripts showing differential accumulation between resistant and susceptible NILs were compared to results from previous wheat/barley-F. graminearum studies and integrated into a wheat/barley-F. graminearum interaction model.

Indexed as

Quantitative Trait LociBiomarkersChromosome MappingDNA, PlantFusariumGene Expression ProfilingHordeumImmunity, InnateMycosesOligonucleotide Array Sequence AnalysisPlant DiseasesPolymerase Chain ReactionTrichothecenesTriticumBiomarkersdeoxynivalenolDNA, PlantTrichothecenes

Identifiers

PMID20865292
OpenAlexW1971932255

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.