Evidence map›Paper›PMID 20865039›Full record

ArticlePloS one2010

Genomic characterization of Campylobacter jejuni strain M1.

Carsten Friis, Trudy M Wassenaar, Muhammad A Javed, Lars Snipen, Karin Lagesen, Peter F Hallin, Diane G Newell, Monique Toszeghy, Anne Ridley, Georgina Manning and 1 more

Abstract read
In one paragraph

Article in PloS one, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 57 papers.

0numbers the graph read from it
0cells of the map it votes in
57citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

57 citing papers in PubMed.

  1. Molecular profiling ofOpen veterinary journal · 2026
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  3. Applied and environmental microbiology · 2025
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  9. Transient internalization ofMicrobiology (Reading, England) · 2022
    Article
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  11. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Carsten FriisDepartment of Systems Biology, The Technical University of Denmark, Lyngby, Denmark. carsten@cbs.dtu.dk
Trudy M Wassenaar
Muhammad A Javed
Lars Snipen
Karin Lagesen
Peter F Hallin
Diane G Newell
Monique Toszeghy
Anne Ridley
Georgina Manning
David W Ussery

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Campylobacter jejuni strain M1 (laboratory designation 99/308) is a rarely documented case of direct transmission of C. jejuni from chicken to a person, resulting in enteritis. We have sequenced the genome of C. jejuni strain M1, and compared this to 12 other C. jejuni sequenced genomes currently publicly available. Compared to these, M1 is closest to strain 81116. Based on the 13 genome sequences, we have identified the C. jejuni pan-genome, as well as the core genome, the auxiliary genes, and genes unique between strains M1 and 81116. The pan-genome contains 2,427 gene families, whilst the core genome comprised 1,295 gene families, or about two-thirds of the gene content of the average of the sequenced C. jejuni genomes. Various comparison and visualization tools were applied to the 13 C. jejuni genome sequences, including a species pan- and core genome plot, a BLAST Matrix and a BLAST Atlas. Trees based on 16S rRNA sequences and on the total gene families in each genome are presented. The findings are discussed in the background of the proven virulence potential of M1.

Indexed as

Genome, BacterialAnimalsBacterial ProteinsCampylobacter InfectionsCampylobacter jejuniChickensChromosome MappingHumansMolecular Sequence DataPhylogenyPoultry DiseasesBacterial Proteins

Identifiers

PMID20865039
PMCPMC2928727

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.