Evidence map›Paper›PMID 20862322›Full record

ArticlePLoS pathogens2010

Association of Tat with promoters of PTEN and PP2A subunits is key to transcriptional activation of apoptotic pathways in HIV-infected CD4+ T cells.

Nayoung Kim, Sami Kukkonen, Sumeet Gupta, Anna Aldovini

Open access · goldAbstract read
In one paragraph

Article in PLoS pathogens, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 53 citations in OpenAlex.

  1. Trial
  2. Review
  3. Article
  4. Article
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  6. Cure and Long-Term Remission Strategies.Methods in molecular biology (Clifton, N.J.) · 2022
    Review
  7. Article
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  15. Review
  16. Review
  17. Article
  18. Article
  19. Functional roles of HIV-1 Tat protein in the nucleus.Cellular and molecular life sciences : CMLS · 2016
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Nayoung KimChildren's Hospital Boston, Department of Medicine, and Harvard Medical School, Department of Pediatrics, Boston, Massachusetts, United States of America.
Sami Kukkonen
Sumeet Gupta
Anna Aldovini
Boston Children's Hospital · USMassachusetts Institute of Technology · US

Funding

Molecular mech/gene expression reprogramming by HIV TATR01AI060398 · NIAID · CHILDREN'S HOSPITAL BOSTON · PI ALDOVINI, ANNA · 2005 to 2009
$2.0M
NIAID NIH HHS R01 AI060398
6 · The paper itself

Abstract

Apoptosis in HIV-1-infected CD4+ primary T cells is triggered by the alteration of the PI3K and p53 pathways, which converge on the FOXO3a transcriptional activator. Tat alone can cause activation of FOXO3a and of its proapoptotic target genes. To understand how Tat affects this pathway, we carried out ChIP-Chip experiments with Tat. Tat associates with the promoters of PTEN and two PP2A subunit genes, but not with the FOXO3a promoter. PTEN and PP2A encode phosphatases, whose levels and activity are increased when Tat is expressed. They counteract phosphorylation of Akt1 and FOXO3a, and so activate transcriptional activity of FOXO3a. FOXO3a promotes increased transcription of Egr-1, which can further stimulate the transcription of PTEN, thereby reinforcing the pathway that leads to FOXO3a transcriptional activation. RNAi experiments support the role of PTEN and PP2A in the initiation of the Tat-mediated cascade, which is critical to apoptosis. The increased accumulation of PTEN and PP2A subunit mRNAs during Tat expression is more likely to be the result of increased transcription initiation and not relief of promoter-proximal pausing of RNAPII. The Tat-PTEN and -PP2A promoter interactions provide a mechanistic explanation of Tat-mediated apoptosis in CD4+ T cells.

Indexed as

ApoptosisBiomarkersBlotting, WesternCD4-Positive T-LymphocytesChromatin ImmunoprecipitationFlow CytometryFluorescent Antibody TechniqueForkhead Transcription FactorsGene Expression ProfilingHIV-1HIV InfectionsHumansLuciferasesOligonucleotide Array Sequence AnalysisPhosphorylationPromoter Regions, GeneticBiomarkersForkhead Transcription FactorsLuciferasesProtein Phosphatase 2Protein SubunitsProto-Oncogene Proteins c-aktPTEN PhosphohydrolasePTEN protein, humanRNA, MessengerRNA, Small Interferingtat Gene Products, Human Immunodeficiency Virus

Identifiers

PMID20862322
PMCPMC2940756
OpenAlexW1975616044

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.